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View Structure Prediction Details

Protein: YHR131C
Organism: Saccharomyces cerevisiae
Length: 840 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for YHR131C.

Description E-value Query
Range
Subject
Range
gi|207341777 - gi|207341777|gb|EDZ69739.1| YNL144Cp-like protein [Saccharomyces cerevisiae AWRI1631]
YNL144C - Putative protein of unknown function; the authentic, non-tagged protein is detected in highly purifi...
YNO4_YEAST - Uncharacterized protein YNL144C OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YNL144C ...
0.0 [9..467] [20..464]
gi|208965648, gi... - gi|208965648|dbj|BAG72838.1| TSPY-like 2 protein [synthetic construct], gi|117644200|emb|CAL37594.1|...
HGNC:24358|MIM:3... - 2
TSPYL2 - TSPY-like 2
0.001 [777..834] [545..602]

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Predicted Domain #1
Region A:
Residues: [1-181]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MANNRIERLK SPSSSSTCSM DEVLITSSNN SSSICLETMR QLPREGVSGQ INIIKETAAS  60
   61 SSSHAALFIK QDLYEHIDPL PAYPPSYDLV NPNKEVRFPI FGDTAPCPKS SLPPLYAPAV 120
  121 YELTLISLKL ERLSPYEISS NRSWRNFIIE INSTQLNFYH IDESLTKHIR NYSSGETKSE 180
  181 K

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [182-327]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 EDRIHSDLVH RSDQSQHLHH RLFTLPTRSA SEFKKADQER ISYRVKRDRS RYLTDEALYK  60
   61 SFTLQNARFG IPTDYTKKSF VLRMSCESEQ FLLRFSHIDD MIDWSMYLSI GISVSLDLEV 120
  121 REYPDYRIVP RRRRRRRRRR RRRRHT

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 4.481486
Match: PF00169
Description: PH domain

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [328-474]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 HRSESSMGSF SQRFIRSNSR PDLIQRYSTG SSTNNNTTIR ERSNTFTAGL LDHYCTGLSK  60
   61 TPTEALISSA ASGESSDNST LGSTRSLSGC SASRSIASRS LKFKIKNFFR PKNSSRTEKL 120
  121 HRLRSNSSNL NSVIETEEDD EHHESSG

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [475-739]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GDHPEPGVPV NTTIKVERPM HRNRAISMPQ RQSLRRAISE EVVPIKFPNS TVGESVHSPS  60
   61 PIEHLSVDGC EIMLQSQNAV MKEELRSVAS NLVANERDEA SIRPKPQSSS IYLSGLAPNG 120
  121 ESATDLSQSS RSLCLTNRDA EINDDESATE TDEDENDGET DEYAGDDTND DTDDSNIGYA 180
  181 YGSESDYSCL IEERIRNRRR ASSTLSCFSN IPYGTDDIKW KPAIKEISRR RYLRDSLKCI 240
  241 KPFLDSNDCL GKVIYIPVSG PTFET

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #5
Region A:
Residues: [740-840]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SNKIHFSNRQ SLQKQKNHFL KGFIVGPTAL IELNCKNKNA IVGTTKDAED HGEDDGDGDD  60
   61 GEDDDDDDDD DDDDDDDEDD DDDDDDDDDD DDDDDDGQIT A

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle