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View Structure Prediction Details

Protein: ORC6
Organism: Saccharomyces cerevisiae
Length: 435 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ORC6.

Description E-value Query
Range
Subject
Range
gi|151944064 - gi|151944064|gb|EDN62357.1| ORC subunit [Saccharomyces cerevisiae YJM789]
gi|190405897 - gi|190405897|gb|EDV09164.1| ORC 50 kDa subunit [Saccharomyces cerevisiae RM11-1a]
ORC6 - Subunit of the origin recognition complex, which directs DNA replication by binding to replication o...
ORC6_YEAST - Origin recognition complex subunit 6 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=ORC...
0.0 [1..435] [1..435]

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Predicted Domain #1
Region A:
Residues: [1-435]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSMQQVQHCV AEVLRLDPQE KPDWSSGYLK KLTNATSILY NTSLNKVMLK QDEEVARCHI  60
   61 CAYIASQKMN EKHMPDLCYY IDSIPLEPKK AKHLMNLFRQ SLSNSSPMKQ FAWTPSPKKN 120
  121 KRSPVKNGGR FTSSDPKELR NQLFGTPTKV RKSQNNDSFV IPELPPMQTN ESPSITRRKL 180
  181 AFEEDEDEDE EEPGNDGLSL KSHSNKSITG TRNVDSDEYE NHESDPTSEE EPLGVQESRS 240
  241 GRTKQNKAVG KPQSELKTAK ALRKRGRIPN SLLVKKYCKM TTEEIIRLCN DFELPREVAY 300
  301 KIVDEYNINA SRLVCPWQLV CGLVLNCTFI VFNERRRKDP RIDHFIVSKM CSLMLTSKVD 360
  361 DVIECVKLVK ELIIGEKWFR DLQIRYDDFD GIRYDEIIFR KLGSMLQTTN ILVTDDQYNI 420
  421 WKKRIEMDLA LTEPL

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [249-338]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 VGKPQSELKT AKALRKRGRI PNSLLVKKYC KMTTEEIIRL CNDFELPREV AYKIVDEYNI  60
   61 NASRLVCPWQ LVCGLVLNCT FIVFNERRRK 

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [339-435]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DPRIDHFIVS KMCSLMLTSK VDDVIECVKL VKELIIGEKW FRDLQIRYDD FDGIRYDEII  60
   61 FRKLGSMLQT TNILVTDDQY NIWKKRIEMD LALTEPL

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle