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View Structure Prediction Details

Protein: SSZ1
Organism: Saccharomyces cerevisiae
Length: 572 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SSZ1.

Description E-value Query
Range		 Subject
Range
HSP7C_RAT - Heat shock cognate 71 kDa protein OS=Rattus norvegicus GN=Hspa8 PE=1 SV=1
HSP7C_MOUSE - Heat shock cognate 71 kDa protein OS=Mus musculus GN=Hspa8 PE=1 SV=1
gi|148234651, gi... - gi|148234651|ref|NP_001091238.1| hypothetical protein LOC100037033 [Xenopus laevis], gi|120577579|gb...
 0.0 [36..572] [3..503]
gi|123980484, gi... - gi|123995299|gb|ABM85251.1| heat shock 70kDa protein 8 [synthetic construct], gi|123980484|gb|ABM820...
HSP7C_HORSE - Heat shock cognate 71 kDa protein OS=Equus caballus GN=HSPA8 PE=2 SV=1
gi|197097502 - gi|197097502|ref|NP_001125783.1| heat shock 70kDa protein 8 [Pongo abelii]
gi|109109056 - gi|109109056|ref|XP_001108049.1| PREDICTED: heat shock 70kDa protein 8 [Macaca mulatta]
gi|55729181 - gi|55729181|emb|CAH91327.1| hypothetical protein [Pongo abelii]
gi|183636984 - gi|183636984|gb|ACC64541.1| heat shock protein 8 (predicted) [Rhinolophus ferrumequinum]
HSP7C_SAGOE - Heat shock cognate 71 kDa protein OS=Saguinus oedipus GN=HSPA8 PE=2 SV=1
gi|57085907 - gi|57085907|ref|XP_536543.1| PREDICTED: similar to Heat shock cognate 71 kDa protein (Heat shock 70 ...
tr|M3VW17|M3VW17... - Uncharacterized protein OS=Felis catus GN=HSPA8 PE=3 SV=1
HSPA8 - heat shock 70kDa protein 8
gi|114640901 - gi|114640901|ref|XP_508830.2| PREDICTED: heat shock 70kDa protein 8 [Pan troglodytes]
 0.0 [36..572] [3..503]
HSP7C_BOVIN, HS7... - Heat shock cognate 71 kDa protein (Heat shock 70 kDa protein 8) - Bos taurus (Bovine), (P19120) Heat...
 0.0 [36..572] [3..503]
HSP70_ONCTS - Heat shock 70 kDa protein OS=Oncorhynchus tshawytscha GN=hsp70 PE=2 SV=1
 0.0 [33..572] [2..505]
HSP71_ORYLA - Heat shock 70 kDa protein 1 OS=Oryzias latipes PE=3 SV=1
 0.0 [33..572] [2..505]
gi|16041102 - gi|16041102|dbj|BAB69718.1| hypothetical protein [Macaca fascicularis]
 0.0 [36..572] [3..503]
HSP7C_CHICK - Heat shock cognate 71 kDa protein OS=Gallus gallus GN=HSPA8 PE=1 SV=1
 0.0 [36..572] [3..503]
gi|16611913 - gi|16611913|gb|AAL27404.1|AF427596_1 70 kDa heat shock protein [Artemia franciscana]
 0.0 [36..572] [3..503]
gi|7861932, gi|1... - gi|7861932|gb|AAF70445.1| Hsp70 [Danio rerio], gi|18858871|ref|NP_571472.1| heat shock cognate 70-kd...
 0.0 [33..572] [2..505]
HSP7C_CRIGR - Heat shock cognate 71 kDa protein OS=Cricetulus griseus GN=HSPA8 PE=2 SV=1
 0.0 [36..572] [3..503]

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Predicted Domain #1
Region A:
Residues: [1-207] 
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKYMVVSSPI QEVLRLHKYI EISTTTITVK ITNKMSSPVI GITFGNTSSS IAYINPKNDV  60
   61 DVIANPDGER AIPSALSYVG EDEYHGGQAL QQLIRNPKNT IINFRDFIGL PFDKCDVSKC 120
  121 ANGAPAVEVD GKVGFVISRG EGKEEKLTVD EVVSRHLNRL KLAAEDYIGS AVKEAVLTVP 180
  181 TNFSEEQKTA LKASAAKIGL QIVQFIN

[Run NCBI BLAST on this sequence.]

Region B:
Residues: [407-428] 
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 ELAASGAALQ ARLISDYDAD EL

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 1526.9897
Match: 1hpm__
Description: Heat shock protein 70kDa, ATPase fragment
Matching Structure (courtesy of the PDB):

Predicted Domain #2
Region A:
Residues: [208-264] 
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 EPSAALLAHA EQFPFEKDVN VVVADFGGIR SDAAVIAVRN GIFTILATAH DLSLGGD

[Run NCBI BLAST on this sequence.]

Region B:
Residues: [340-406] 
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NKVFAQFSSF VDSVIAKAEL DPLDIDAVLL TGGVSFTPKL TTNLEYTLPE SVEILGPQNK  60
   61 NASNNPN

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 1526.9897
Match: 1hpm__
Description: Heat shock protein 70kDa, ATPase fragment
Matching Structure (courtesy of the PDB):

Predicted Domain #3
Region A:
Residues: [265-339] 
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NLDTELVEYF ASEFQKKYQA NPRKNARSLA KLKANSSITK KTLSNATSAT ISIDSLADGF  60
   61 DYHASINRMR YELVA

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 1526.9897
Match: 1hpm__
Description: Heat shock protein 70kDa, ATPase fragment
Matching Structure (courtesy of the PDB):

Predicted Domain #4
Region A:
Residues: [429-572] 
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 AEALQPVIVN TPHLKKPIGL IGAKGEFHPV LLAETSFPVQ KKLTLKQAKG DFLIGVYEGD  60
   61 HHIEEKTLEP IPKEENAEED DESEWSDDEP EVVREKLYTL GTKLMELGIK NANGVEIIFN 120
  121 INKDGALRVT ARDLKTGNAV KGEL

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 47.39794
Match: 1ckrA_
Description: DnaK
Matching Structure (courtesy of the PDB):
YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle