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View Structure Prediction Details

Protein: CUP1-2, CUP1-1
Organism: Saccharomyces cerevisiae
Length: 61 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CUP1-2, CUP1-1.

Description E-value Query
Range
Subject
Range
gi|2780950, gi|1... - gi|2780950|pdb|1AQS| Chain , Cu-Metallothionein From Saccharomyces Cerevisiae, Nmr, 10 Structures,...
71.0 [0..9] [61..1]

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Predicted Domain #1
Region A:
Residues: [1-61]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFSELINFQN EGHECQCQCG SCKNNEQCQK SCSCPTGCNS DDKCPCGNKS EETKKSCCSG  60
   61 K

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

    MCM
Score
SCOP
Match
SCOP Description
View Download 0.539 d.15.2 CAD & PB1 domains
View Download 0.511 d.15.2 CAD & PB1 domains
View Download 0.295 d.68.5 C-terminal domain of ProRS
View Download 0.294 d.15.7 Immunoglobulin-binding domains
View Download 0.280 d.15.1 Ubiquitin-like
View Download 0.271 a.60.2 RuvA domain 2-like
View Download 0.257 d.15.1 Ubiquitin-like
View Download 0.243 d.68.6 DNA-binding protein Sso10b (AlbA)


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle