YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: YHR032W
Organism: Saccharomyces cerevisiae
Length: 581 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for YHR032W.

Description E-value Query
Range
Subject
Range
gi|382954 - gi|382954|prf||1901324A ethionine resistance gene
533.0 [0..1] [579..1]
gi|49527044 - gi|49527044|emb|CAG60680.1| unnamed protein product [Candida glabrata]
gi|49527044, gi|... - gi|50290601|ref|XP_447733.1| unnamed protein product [Candida glabrata], gi|49527044|emb|CAG60680.1|...
347.0 [0..1] [579..1]
gi|113548993, gi... - gi|115453843|ref|NP_001050522.1| Os03g0571900 [Oryza sativa (japonica cultivar-group)], gi|113548993...
346.0 [0..142] [580..623]
gi|49645189 - gi|49645189|emb|CAG98761.1| KLLA0F21802p [Kluyveromyces lactis]
gi|50312043, gi|... - gi|50312043|ref|XP_456053.1| unnamed protein product [Kluyveromyces lactis], gi|49645189|emb|CAG9876...
342.0 [0..1] [579..1]
gi|45190837, gi|... - gi|45190837|ref|NP_985091.1| AER234Wp [Ashbya gossypii ATCC 10895], gi|44983879|gb|AAS52915.1| AER23...
gi|44983879 - gi|44983879|gb|AAS52915.1| AER234Wp [Ashbya gossypii ATCC 10895]
323.0 [0..1] [579..1]
gi|16797803 - gi|16797803|dbj|BAB71817.1| hypothetical membrane protein-1 [Marchantia polymorpha]
311.0 [0..126] [579..4]
gi|30047775 - gi|30047775|gb|AAH50592.1| SLC47A1 protein [Homo sapiens]
306.0 [0..135] [579..22]
SPAC323.07c - MatE family transporter
YL47_SCHPO - Uncharacterized transporter C323.07c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC3...
304.0 [0..101] [580..27]

Back

Predicted Domain #1
Region A:
Residues: [1-144]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSKQFSHTTN DRRSSIIYST SVGKAGLFTP ADYIPQESEE NLIEGEEQEG SEEEPSYTGN  60
   61 DDETEREGEY HSLLDANNSR TLQQEAWQQG YDSHDRKRLL DEERDLLIDN KLLSQHGNGG 120
  121 GDIESHGHGQ AIGPDEEERP AEIA

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

    MCM
Score
SCOP
Match
SCOP Description
View Download 0.653 a.78.1 Fatty acid responsive transcription factor FadR, C-terminal domain
View Download 0.653 a.78.1 Fatty acid responsive transcription factor FadR, C-terminal domain
View Download 0.461 f.1.4 Bcl-2 inhibitors of programmed cell death
View Download 0.433 a.47.5 Description not found.
View Download 0.403 f.1.4 Bcl-2 inhibitors of programmed cell death
View Download 0.339 a.121.1 Tetracyclin repressor-like, C-terminal domain
View Download 0.299 a.27.1 Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
View Download 0.282 a.69.1 C-terminal domain of alpha and beta subunits of F1 ATP synthase
View Download 0.263 d.26.1 FKBP-like
View Download 0.245 a.118.8 TPR-like

Predicted Domain #2
Region A:
Residues: [145-320]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NTWESAIESG QKISTTFKRE TQVITMNALP LIFTFILQNS LSLASIFSVS HLGTKELGGV  60
   61 TLGSMTANIT GLAAIQGLCT CLDTLCAQAY GAKNYHLVGV LVQRCAVITI LAFLPMMYVW 120
  121 FVWSEKILAL MIPERELCAL AANYLRVTAF GVPGFILFEC GKRFLQCQGI FHASTI

[Run NCBI BLAST on this sequence.]

Detection Method: ab initio
Confidence: 7.39
Match:
Description: No description for 1b3uA was found.

Predicted Domain #3
Region A:
Residues: [321-581]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 VLFVCAPLNA LMNYLLVWND KIGIGYLGAP LSVVINYWLM TLGLLIYAMT TKHKERPLKC  60
   61 WNGIIPKEQA FKNWRKMINL AIPGVVMVEA EFLGFEVLTI FASHLGTDAL GAQSIVATIA 120
  121 SLAYQVPFSI SVSTSTRVAN FIGASLYDSC MITCRVSLLL SFVCSSMNMF VICRYKEQIA 180
  181 SLFSTESAVV KMVVDTLPLL AFMQLFDAFN ASTAGCLRGQ GRQKNRWVHQ PSRILLPRCA 240
  241 HGICVSIPVS SGCRRLMVGY N

[Run NCBI BLAST on this sequence.]

Detection Method: ab initio
Confidence: 7.39
Match:
Description: No description for 1b3uA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle