| Protein: | WSC4 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 605 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for WSC4.
| Description | E-value | Query Range |
Subject Range |
|
|
2.0E-67 | [1..550] | [544..1129] |
|
|
1.0E-65 | [81..545] | [530..999] |
|
Region A: Residues: [1-114] |
1 11 21 31 41 51
| | | | | |
1 MQTSMVSAKV SIWLVCSVIC SSLVRATQSV CSSQNTATTD GVRNQFQSNG WCSNNCAGHQ 60
61 FAIVQGFMCW CSDSEPSTQT SVGDCSGTCP GYGYEDCGNA DKDLFGYIYL GQTP
|
| Detection Method: |  |
| Confidence: | 25.031517 |
| Match: | PF01822 |
| Description: | WSC domain |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [115-281] |
1 11 21 31 41 51
| | | | | |
1 LSSVQSVETS TESSVYVSSS SITSSSSTSI VDTTTISPTL TSTSTTPLTT ASTSTTPSTD 60
61 ITSALPTTTS TKLSTSIPTS TTSSTSTTTS TSSSTSTTVS VTSSTSTTTS TTSSTLISTS 120
121 TSSSSSSTPT TTSSAPISTS TTSSTSTSTS TTSPTSSSAP TSSSNTT
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [282-605] |
1 11 21 31 41 51
| | | | | |
1 PTSTTFTTTS PSTAPSSTTV TYTSTTASPI TSTITSVNLQ TSLKYSVITV TSVHTMDTNI 60
61 SEITSRYLTM KKVITQIYSS TLGATPTSAV ATTSASVGGR ITNNNNSNTT NSNTPTNKST 120
121 EKKGYWDSPG KIAATFVVVG VVCLVIICIL IYLIHHYRTR PARKAQDFEN EYQSKFYQSK 180
181 YPNEVTTTTL HTPSPSSNST FSTPRLIYTD EKGQIMSESP SPRQSTYSLT AGSPPNDPST 240
241 LASPFHDPIL PRRTSTFLHS PIQKQHEKME SNVTLGEDTV LVDQRLDPSK MLNTLANDDA 300
301 TNHSTISLSD NVDYSRRVLR LMNE
|
| Detection Method: | |
| Confidence: | 12.29 |
| Match: | 1ei3A |
| Description: | Fibrinogen |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [413-605] |
1 11 21 31 41 51
| | | | | |
1 IAATFVVVGV VCLVIICILI YLIHHYRTRP ARKAQDFENE YQSKFYQSKY PNEVTTTTLH 60
61 TPSPSSNSTF STPRLIYTDE KGQIMSESPS PRQSTYSLTA GSPPNDPSTL ASPFHDPILP 120
121 RRTSTFLHSP IQKQHEKMES NVTLGEDTVL VDQRLDPSKM LNTLANDDAT NHSTISLSDN 180
181 VDYSRRVLRL MNE
|
| Detection Method: | |
| Confidence: | 1.15 |
| Match: | 2j63A |
| Description: | No description for 2j63A was found. |
