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View Structure Prediction Details

Protein: YGR293C
Organism: Saccharomyces cerevisiae
Length: 153 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for YGR293C.

Description E-value Query
Range
Subject
Range
YBR300C - [DUBIOUS] Dubious open reading frame unlikely to encode a protein, based on available experimental a...
YB8J_YEAST - Putative uncharacterized protein YBR300C OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN...
210.0 [0..1] [121..1]

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Predicted Domain #1
Region A:
Residues: [1-153]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAATPAAIEV SLTIVFVLFF SADVSLTRNS EMKAHTSKMD SYSSSIYMNV LPTSLAQTSY  60
   61 HLAPISHLKC LSVQCSSHIH YSYYYGASVL ERCVFHRSRI RGARFIVPIP FYCISKAQEC 120
  121 FLTVYILPKN PFRVPSEMQL QLLAKKKLKP NLL

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Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

    MCM
Score
SCOP
Match
SCOP Description
View Download 0.563 d.227.1 OsmC-like
View Download 0.558 b.24.1 Hyaluronate lyase-like, C-terminal domain
View Download 0.438 d.58.21 Molybdenum cofactor biosynthesis protein C, MoaC
View Download 0.436 d.109.1 Actin depolymerizing proteins
View Download 0.398 d.109.1 Actin depolymerizing proteins


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle