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View Structure Prediction Details

Protein: BUD32
Organism: Saccharomyces cerevisiae
Length: 261 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for BUD32.

Description E-value Query
Range		 Subject
Range
gi|16904226 - gi|16904226|gb|AAL30820.1|AF435452_1 calcium/calmodulin-dependent protein kinase CaMK3 [Nicotiana ta...
 4.0E-85 [3..259] [135..402]
gi|7507776 - gi|7507776|pir||T16867 probable cytochrome P450 T13C5.1 [similarity] - Caenorhabditis elegans
 2.0E-83 [4..257] [7..261]
gi|322596, gi|11... - gi|6714479|gb|AAF26165.1|AC008261_22 putative SNF1-related protein kinase [Arabidopsis thaliana], pi...
 6.0E-83 [9..257] [12..261]
CRK_DAUCA - CDPK-related protein kinase OS=Daucus carota GN=CRK PE=2 SV=1
 1.0E-82 [3..259] [135..402]
gi|4336426 - gi|4336426|gb|AAD17800.1| Ca2+-dependent protein kinase [Mesembryanthemum crystallinum]
 2.0E-82 [5..259] [75..336]
gi|7672782 - gi|7672782|gb|AAF66639.1|AF143743_1 SNF1 [Lycopersicon esculentum]
 2.0E-82 [4..257] [7..261]

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Predicted Domain #1
Region A:
Residues: [1-115] 
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTQEFIDKVS SYLTPDVDIA PISQGAEAIV FTTTTHPYLP RAKDSHQKYI IKYRPPKRYR  60
   61 HPQIDQALTK HRTLNESRLL AKLYLIPGLC VPQLIACDPY NGFIWLEFLG EDLPG

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 70.69897
Match: 1a06__
Description: Calmodulin-dependent protein kinase
Matching Structure (courtesy of the PDB):

Predicted Domain #2
Region A:
Residues: [116-261] 
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GHGFSNLKNF LWMHDQDPYS DLVATTLRKV GRQIGLLHWN DYCHGDLTSS NIVLVRDGAR  60
   61 WTPHLIDFGL GSVSNLVEDK GVDLYVLERA ILSTHSKHAE KYNAWIMEGF EEVYREQGAK 120
  121 GAKKLKEVTK RFEEVRLRGR KRSMLG

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 70.69897
Match: 1a06__
Description: Calmodulin-dependent protein kinase
Matching Structure (courtesy of the PDB):
YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle