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View Structure Prediction Details

Protein: PEX21
Organism: Saccharomyces cerevisiae
Length: 288 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PEX21.

Description E-value Query
Range
Subject
Range
gi|45270444 - gi|45270444|gb|AAS56603.1| YGR239C [Saccharomyces cerevisiae]
567.0 [0..1] [288..1]
PEX21_KLULA - Peroxisomal membrane protein PEX21 OS=Kluyveromyces lactis GN=PEX21 PE=3 SV=1
PEX21_KLULA - Peroxisomal membrane protein PEX21 OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 ...
89.0 [0..85] [288..89]
PEX21_CANGA - Peroxisomal membrane protein PEX21 OS=Candida glabrata GN=PEX21 PE=3 SV=1
PEX21_CANGA - Peroxisomal membrane protein PEX21 OS=Candida glabrata (strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC...
80.0 [0..1] [255..1]
PEX21_ASHGO - Peroxisomal membrane protein PEX21 OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / ...
PEX21_ASHGO - Peroxisomal membrane protein PEX21 OS=Ashbya gossypii GN=PEX21 PE=3 SV=1
80.0 [0..87] [282..80]

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Predicted Domain #1
Region A:
Residues: [1-128]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPSVCHTSPI EKIIQQGHRI QNDSLIPSKR TKLAHTELTA HYATEDSHVE KHFLHNGSNF  60
   61 DGIDNVRYQN QPSPLTFITP NNTVDSSDWV PQFSSMKIDD SLEFSSEYKR LYSNYESQQR 120
  121 LNSSRQHL

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [129-288]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PFKNCMIRKT SCTYPPQKTL RQQRQGNRDN PTDAFQFDAE FQVLEREIQK ERYEPITRRD  60
   61 EKWFDQDQSE LQRIATDIVK CCTPPPSSAS SSSTLSSSVE SKLSESKFIQ LMRNISSGDV 120
  121 TLKKNADGNS ASELFSSNNG ELVGNRHIFV KDEIHKDILD 

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle