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View Structure Prediction Details

Protein: YGR182C
Organism: Saccharomyces cerevisiae
Length: 117 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

No multiple sequence alignment data found for YGR182C.

Predicted Domain #1
Region A:
Residues: [1-117]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSRQSAFKFQ NGNRHERACL SDVHKILIII LYSTKGKREL GKRITHFMYI HIFCTYLYQA  60
   61 SIVQYCSSTL LNVIAFSWYP LNLIYKYEYI LRSKLILMVC LDFARSGGVL DSGDVSL

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

    MCM
Score
SCOP
Match
SCOP Description
View Download 0.939 a.47.1 STAT
View Download 0.933 a.7.1 Spectrin repeat
View Download 0.867 a.7.6 Ribosomal protein S20
View Download 0.837 a.7.6 Ribosomal protein S20
View Download 0.836 a.24.10 Histidine-containing phosphotransfer domain, HPT domain
View Download 0.836 a.7.8 GAT domain
View Download 0.814 a.47.2 t-snare proteins
View Download 0.803 a.24.17 Group V grass pollen allergen
View Download 0.774 a.2.6 Effector domain of the protein kinase pkn/prk1


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle