| Protein: | CLC1 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 233 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CLC1.
| Description | E-value | Query Range |
Subject Range |
|
|
5.0E-61 | [34..227] | [56..282] |
|
|
6.0E-59 | [34..227] | [15..209] |
|
|
2.0E-57 | [34..227] | [18..244] |
|
|
1.0E-56 | [1..233] | [1..233] |
|
|
6.0E-56 | [34..227] | [18..244] |
|
|
7.0E-56 | [34..227] | [18..231] |
|
Region A: Residues: [1-233] |
1 11 21 31 41 51
| | | | | |
1 MSEKFPPLED QNIDFTPNDK KDDDTDFLKR EAEILGDEFK TEQDDILETE ASPAKDDDEI 60
61 RDFEEQFPDI NSANGAVSSD QNGSATVSSG NDNGEADDDF STFEGANQST ESVKEDRSEV 120
121 VDQWKQRRAV EIHEKDLKDE ELKKELQDEA IKHIDDFYDS YNKKKEQQLE DAAKEAEAFL 180
181 KKRDEFFGQD NTTWDRALQL INQDDADIIG GRDRSKLKEI LLRLKGNAKA PGA
|
| Detection Method: |  |
| Confidence: | 145.657577 |
| Match: | PF01086 |
| Description: | Clathrin light chain |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [96-233] |
1 11 21 31 41 51
| | | | | |
1 ADDDFSTFEG ANQSTESVKE DRSEVVDQWK QRRAVEIHEK DLKDEELKKE LQDEAIKHID 60
61 DFYDSYNKKK EQQLEDAAKE AEAFLKKRDE FFGQDNTTWD RALQLINQDD ADIIGGRDRS 120
121 KLKEILLRLK GNAKAPGA
|
| Detection Method: | |
| Confidence: | 17.522879 |
| Match: | 1xi4J |
| Description: | Clathrin D6 Coat |
Matching Structure (courtesy of the PDB): |
|
