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View Structure Prediction Details

Protein: KRE11
Organism: Saccharomyces cerevisiae
Length: 560 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for KRE11.

Description E-value Query
Range
Subject
Range
KRE11 - Protein involved in biosynthesis of cell wall beta-glucans; subunit of the TRAPP (transport protein ...
TRS65_YEAST - Trafficking protein particle complex II-specific subunit 65 OS=Saccharomyces cerevisiae (strain ATCC...
gi|151943442 - gi|151943442|gb|EDN61753.1| killer toxin resistant protein [Saccharomyces cerevisiae YJM789]
gi|190406819 - gi|190406819|gb|EDV10086.1| beta-glucan synthesis-associated protein KRE11 [Saccharomyces cerevisiae...
0.0 [1..560] [1..560]

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Predicted Domain #1
Region A:
Residues: [1-560]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MECFVPLRCD LDGSNIEQLR QSHLSRKFII FDEQLNLWLW FQGNSQENKR FVLQNMIILI  60
   61 NEAQVTRTST IDDYFTQVEN NENLWRLKND CCSKILFKSN VVMNNGYNNQ IKFVFEYKSV 120
  121 DANFNNQDSL QDPQAKYTLD KYSSEEILPS FEPVYSWSSA ATKSSKNTNN HLEKNNRATH 180
  181 RVSSKNSEVH EADVSRNPNT FTLKLQYPIF SLLNMRLRNI SLKSEHCILS SLDFQTSKAS 240
  241 EQLTKKFIYP QEHNSFLKLN FQEISYKLID GTSQIELDPI CPLKVPLTAF SYDSISATFK 300
  301 LVLLPKSTQP HRVKITLAYE LELHPNLKLP VRTSWETEVT LKRSMPISST SSQYSSNNNN 360
  361 TNHSASFNGA ANNVNSGGLA NLRLGGVSSS RFSLGAASTT SLVNSKLSNV KFKFINSNIK 420
  421 VIKGEKFTMR LQIINSSSSP LDLVVYYNNT INPIPSANNV RNSNGINNCG MNNGTIPNSP 480
  481 LTLENQYQLH NKYRKIAEGI ILLSNDYKIP VVPPRETYFA DLRFIGIMSG YYGTLSGLKV 540
  541 LDLNTNELIE VGNGASVLIQ 

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle