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View Structure Prediction Details

Protein: ECL1
Organism: Saccharomyces cerevisiae
Length: 211 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ECL1.

Description E-value Query
Range
Subject
Range
ECL1 - Protein of unknown function, affects chronological lifespan; induced by iron homeostasis transcripti...
ECL1_YEAST - Extender of the chronological lifespan protein 1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S...
gi|190406838 - gi|190406838|gb|EDV10105.1| conserved hypothetical protein [Saccharomyces cerevisiae RM11-1a]
6.0E-94 [1..211] [1..211]

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Predicted Domain #1
Region A:
Residues: [1-211]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSTAFNDYCT VCDRLIPTSP QKTNINTRKI QRDNETKSSL QSNKLYCSED CKLKDSNPLN  60
   61 EKLLSHLHKK SKTSHSHNLT PPLSYSKNLT ASNLFEPTTS LSSSPTSSTI PFDELEKLES 120
  121 LLISPLLLPQ DGIVNPKQES NPSRVDEYDE NEHYLNLADS LRLDSSYQLH SKAHLGYENN 180
  181 LPRSNDLIDD HLISDQIIEN NYNLWFRLSS S

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Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle