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View Structure Prediction Details

Protein: ASN2
Organism: Saccharomyces cerevisiae
Length: 572 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ASN2.

Description E-value Query
Range
Subject
Range
gi|19699035 - gi|19699035|gb|AAL91002.1| asparagine synthetase [Securigera parviflora]
0.0 [1..570] [1..553]
ASNS_TRIVS - Asparagine synthetase [glutamine-hydrolyzing] OS=Triphysaria versicolor GN=AS PE=2 SV=3
0.0 [1..570] [1..554]
ASNS1_ARATH - Asparagine synthetase [glutamine-hydrolyzing] 1 OS=Arabidopsis thaliana GN=ASN1 PE=2 SV=2
0.0 [1..570] [1..554]
gi|1617002 - gi|1617002|emb|CAA67889.1| asparagine synthetase [Asparagus officinalis]
0.0 [1..570] [1..554]
ASNS1_LOTJA - Asparagine synthetase [glutamine-hydrolyzing] 1 OS=Lotus japonicus GN=AS1 PE=2 SV=2
0.0 [1..570] [1..554]
gi|3821280 - gi|3821280|emb|CAA08913.1| asparagine synthetase type II [Phaseolus vulgaris]
0.0 [1..570] [1..554]
gi|1184265 - gi|1184265|gb|AAB48058.1| asparagine synthetase [Medicago sativa]
0.0 [1..570] [1..555]

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Predicted Domain #1
Region A:
Residues: [1-192]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MCGIFAAFKH EDIHNFKPKA LQLSKKIRHR GPDWSGNAVM NSTIFVHERL AIVGLDSGAQ  60
   61 PITSADGEYM LGVNGEIYNH IQLREMCSDY KFQTFSDCEP IIPLYLEHDI DAPKYLDGMF 120
  121 AFCLYDSKKD RIVAARDPIG VVTLYMGRSS QSPETVYFAS ELKCLTDVCD SIISFPPGHV 180
  181 YDSETDKITR YF

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 1646.0
Match: 1ct9A_
Description: Asparagine synthetase B, C-terminal domain; Asparagine synthetase B, N-terminal domain
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
asparagine synthase (glutamine-hydrolyzing) activity 3.86770527955716 bayes_pls_golite062009
asparaginase activity 2.94567124791739 bayes_pls_golite062009
peptidase activity 1.76298553502805 bayes_pls_golite062009
DNA binding 1.66643360311025 bayes_pls_golite062009
nucleic acid binding 1.65897778831304 bayes_pls_golite062009
endopeptidase activity 1.58381740825719 bayes_pls_golite062009
peptidase activity, acting on L-amino acid peptides 1.56290563467621 bayes_pls_golite062009
acid-ammonia (or amide) ligase activity 1.41109692769794 bayes_pls_golite062009
N4-(beta-N-acetylglucosaminyl)-L-asparaginase activity 1.2528157874993 bayes_pls_golite062009
catalytic activity 1.19663085909195 bayes_pls_golite062009
binding 1.18139971903068 bayes_pls_golite062009
carbon-nitrogen ligase activity, with glutamine as amido-N-donor 1.17174228126736 bayes_pls_golite062009
hydrolase activity 1.05106912722792 bayes_pls_golite062009
protein binding 1.03373728327879 bayes_pls_golite062009

Predicted Domain #2
Region A:
Residues: [193-572]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 TPDWLDEKRI PSTPVDYHAI RHSLEKAVRK RLMAEVPYGV LLSGGLDSSL IAAIAARETE  60
   61 KANADANEDN NVDEKQLAGI DDQGHLHTSG WSRLHSFAIG LPNAPDLQAA RKVAKFIGSI 120
  121 HHEHTFTLQE GLDALDDVIY HLETYDVTTI RASTPMFLLS RKIKAQGVKM VLSGEGSDEI 180
  181 FGGYLYFAQA PSAAEFHTES VQRVKNLHLA DCLRANKSTM AWGLEARVPF LDKDFLQLCM 240
  241 NIDPNEKMIK PKEGRIEKYI LRKAFDTTDE PDVKPYLPEE ILWRQKEQFS DGVGYSWIDG 300
  301 LRDTAERAIS DAMFANPKAD WGDDIPTTKE AYWYRLKFDA WFPQKTAADT VMRWIPKADW 360
  361 GCAEDPSGRY AKIHEKHVSA 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 1646.0
Match: 1ct9A_
Description: Asparagine synthetase B, C-terminal domain; Asparagine synthetase B, N-terminal domain
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle