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View Structure Prediction Details

Protein: MRP13
Organism: Saccharomyces cerevisiae
Length: 339 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for MRP13.

Description E-value Query
Range
Subject
Range
MRP13 - Mitochondrial ribosomal protein of the small subunit
gi|190406896 - gi|190406896|gb|EDV10163.1| 35 kDa mitochondrial ribosomal small subunit protein [Saccharomyces cere...
gi|207345154 - gi|207345154|gb|EDZ72065.1| YGR084Cp-like protein [Saccharomyces cerevisiae AWRI1631]
RT13_YEAST - 37S ribosomal protein MRP13, mitochondrial OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) ...
0.0 [1..339] [1..339]

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Predicted Domain #1
Region A:
Residues: [1-339]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGTITVVINE GPILLIRALH RATTNKKMFR STVWRRFAST GEIAKAKLDE FLIYHKTDAK  60
   61 LKPFIYRPKN AQILLTKDIR DPKTREPLQP RPPVKPLSKQ TLNDFIYSVE PNSTELLDWF 120
  121 KEWTGTSIRK RAIWTYISPI HVQKMLTASF FKIGKYAHMV GLLYGIEHKF LKAQNPSVFD 180
  181 IEHFFNTNIM CALHRNRLKD YKDAEIAQRK LQVAWKKVLN RKNNTGLANI LVATLGRQIG 240
  241 FTPELTGLQP VDISLPDIPN SSSGAELKDL LSKYEGIYLI ARTLLDIDQH NAQYLELQEF 300
  301 IRQYQNALSE SSDPYDTHLK ALGLLETPPP QESTEKEEK

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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