Protein: | SPT4 |
Organism: | Saccharomyces cerevisiae |
Length: | 102 amino acids |
Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SPT4.
Description | E-value | Query Range |
Subject Range |
|
1.0E-43 | [1..102] | [1..102] |
|
3.0E-43 | [1..102] | [1..102] |
|
1.0E-36 | [5..97] | [14..112] |
|
9.0E-36 | [5..89] | [17..102] |
|
1.0E-35 | [5..97] | [14..112] |
|
9.0E-33 | [5..98] | [13..112] |
|
1.0E-32 | [5..93] | [14..103] |
|
8.0E-31 | [5..102] | [10..105] |
Region A: Residues: [1-102] |
1 11 21 31 41 51 | | | | | | 1 MSSERACMLC GIVQTTNEFN RDGCPNCQGI FEEAGVSTME CTSPSFEGLV GMCKPTKSWV 60 61 AKWLSVDHSI AGMYAIKVDG RLPAEVVELL PHYKPRDGSQ VE |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
MCM Score |
SCOP Match |
SCOP Description | ||
View | Download | 0.793 | d.109.1 | Actin depolymerizing proteins |
View | Download | 0.529 | a.74.1 | Cyclin-like |
View | Download | 0.527 | c.44.2 | Enzyme IIB-cellobiose |
View | Download | 0.465 | c.30.1 | PreATP-grasp domain |
View | Download | 0.462 | d.58.10 | Acylphosphatase-like |
View | Download | 0.443 | c.2.1 | NAD(P)-binding Rossmann-fold domains |
View | Download | 0.430 | a.118.8 | TPR-like |
View | Download | 0.421 | c.58.1 | Aminoacid dehydrogenase-like, N-terminal domain |
View | Download | 0.417 | c.78.2 | Aspartate/glutamate racemase |
View | Download | 0.405 | c.23.3 | Hypothetical protein MTH538 |
View | Download | 0.380 | a.74.1 | Cyclin-like |
View | Download | 0.360 | a.26.1 | 4-helical cytokines |
View | Download | 0.329 | d.211.1 | Ankyrin repeat |
View | Download | 0.303 | c.10.1 | RNI-like |
View | Download | 0.295 | a.80.1 | DNA polymerase III clamp loader subunits, C-terminal domain |
View | Download | 0.293 | d.45.1 | ClpS-like |
View | Download | 0.286 | c.23.6 | Cobalamin (vitamin B12)-binding domain |
View | Download | 0.281 | a.133.1 | Phospholipase A2, PLA2 |
View | Download | 0.281 | b.1.18 | E set domains |
View | Download | 0.271 | d.16.1 | FAD-linked reductases, C-terminal domain |
View | Download | 0.270 | c.2.1 | NAD(P)-binding Rossmann-fold domains |
View | Download | 0.265 | c.52.3 | Eukaryotic RPB5 N-terminal domain |
View | Download | 0.265 | d.108.1 | Acyl-CoA N-acyltransferases (Nat) |
View | Download | 0.253 | c.55.4 | Translational machinery components |
View | Download | 0.247 | c.37.1 | P-loop containing nucleoside triphosphate hydrolases |
View | Download | 0.237 | d.58.7 | RNA-binding domain, RBD |
View | Download | 0.236 | b.40.1 | Staphylococcal nuclease |
View | Download | 0.225 | c.52.1 | Restriction endonuclease-like |
View | Download | 0.224 | c.47.1 | Thioredoxin-like |
View | Download | 0.217 | c.30.1 | PreATP-grasp domain |
View | Download | 0.217 | c.23.1 | CheY-like |
View | Download | 0.215 | c.23.1 | CheY-like |
View | Download | 0.214 | b.6.1 | Cupredoxins |
View | Download | 0.210 | c.23.4 | Succinyl-CoA synthetase domains |
View | Download | 0.204 | d.58.3 | Protease propeptides/inhibitors |
View | Download | 0.203 | c.52.1 | Restriction endonuclease-like |
View | Download | 0.201 | c.58.1 | Aminoacid dehydrogenase-like, N-terminal domain |
View | Download | 0.200 | c.1.17 | Quinolinic acid phosphoribosyltransferase (Nicotinate-nucleotide pyrophosphorylase, NadC), C-terminal domain |