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View Structure Prediction Details

Protein: TAM41
Organism: Saccharomyces cerevisiae
Length: 385 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for TAM41.

Description E-value Query
Range
Subject
Range
TAM41 - Mitochondrial protein involved in protein import into the mitochondrial matrix; maintains the functi...
TAM41_YEAST - Phosphatidate cytidylyltransferase, mitochondrial OS=Saccharomyces cerevisiae (strain ATCC 204508 / ...
0.0 [1..385] [1..385]
gi|190690447, gi... - gi|190691825|gb|ACE87687.1| chromosome 3 open reading frame 31 protein [synthetic construct], gi|190...
C3orf31 - chromosome 3 open reading frame 31
6.0E-99 [115..383] [15..309]
gi|19112600 - gi|19112600|ref|NP_595808.1| hypothetical protein SPBC1A4.06c [Schizosaccharomyces pombe 972h-]
SPBC1A4.06c - mitochondrial matrix protein import protein
3.0E-90 [100..322] [48..266]
CE28809 - status:Partially_confirmed UniProt:Q9N4G7 protein_id:AAF36018.2
5.0E-83 [111..383] [2..319]
gi|6015493 - gi|6015493|emb|CAB57448.1| proline transport helper PTH1 [Candida albicans]
2.0E-81 [100..323] [119..355]

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Predicted Domain #1
Region A:
Residues: [1-103]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLRVSENGLR FLLKCHSTNV SMFNRLLSTQ IKEGRSSIDD AGIIPDGTIN ERPNHYIEGI  60
   61 TKGSDLDLLE KGIRKTDEMT SNFTNYMYKF HRLPPNYGSN QLI

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [104-385]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 TIDKELQKEL DGVMSSFKAP CRFVFGYGSG VFEQAGYSKS HSKPQIDIIL GVTYPSHFHS  60
   61 INMRQNPQHY SSLKYFGSEF VSKFQQIGAG VYFNPFANIN GHDVKYGVVS METLLKDIAT 120
  121 WNTFYLAGRL QKPVKILKND LRVQYWNQLN LKAAATLAKH YTLEKNNNKF DEFQFYKEIT 180
  181 ALSYAGDIRY KLGGENPDKV NNIVTKNFER FQEYYKPIYK EVVLNDSFYL PKGFTLKNTQ 240
  241 RLLLSRISKS SALQTIKGVF TAGITKSIKY AWAKKLKSMR RS

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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Created and Maintained by: Michael Riffle