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View Structure Prediction Details

Protein: YGR045C
Organism: Saccharomyces cerevisiae
Length: 120 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

No multiple sequence alignment data found for YGR045C.

Predicted Domain #1
Region A:
Residues: [1-120]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSQITSKGRR ILDKKIRTFP VGFTSRKVAG HVLNISPYFL LAFSYAENKG QSAFEEIKGS  60
   61 NVIDMSCVIC FNFSCHLFVV IFISRSTETI PTTKLLLSKY IFYCVNALEL TLFLSYKSYS 120
  121 

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

    MCM
Score
SCOP
Match
SCOP Description
View Download 0.794 d.227.1 OsmC-like
View Download 0.794 d.227.1 OsmC-like
View Download 0.773 d.20.1 UBC-like
View Download 0.754 d.108.1 Acyl-CoA N-acyltransferases (Nat)
View Download 0.748 d.52.3 Prokaryotic type KH domain (KH-domain type II)
View Download 0.743 d.233.1 Inhibitor of vertebrate lysozyme, Ivy
View Download 0.726 d.58.20 NAD-binding domain of HMG-CoA reductase
View Download 0.697 d.227.1 OsmC-like
View Download 0.692 d.52.3 Prokaryotic type KH domain (KH-domain type II)


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle