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View Structure Prediction Details

Protein: YGR042W
Organism: Saccharomyces cerevisiae
Length: 271 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for YGR042W.

Description E-value Query
Range
Subject
Range
YGR042W - Putative protein of unknown function; involved in maintenance of proper telomere length; green fluor...
YG1T_YEAST - Uncharacterized protein YGR042W OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YGR042W ...
0.0 [1..271] [1..271]

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Predicted Domain #1
Region A:
Residues: [1-271]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLSHIVEYEC QYTDQLYKKR KIWHDGRLKY FQLNNRFMLY TEKDNVLLAS EFKINSKELK  60
   61 AILNPEGFDI EEHRIFSQFL VIISNIIEEY DRDIQVAATH VRAYPSNLSV QKQRPLISDN 120
  121 APSLNHISTA REVHSNIKVT TPNRKQTEDN ATKGGFNISK LTLKVNKPFK KPKRILSTNV 180
  181 VNESNRPSIR SQKIQEVTPQ LHETNTSTKV QTAGKVALNN DNIAQGNYAT ITEEAKVRDG 240
  241 SDRKKDMANL SKSGKRRVGG IRRIVHEPLG I

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle