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View Structure Prediction Details

Protein: BUD9
Organism: Saccharomyces cerevisiae
Length: 547 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for BUD9.

Description E-value Query
Range
Subject
Range
gi|10442731 - gi|10442731|gb|AAG17454.1|AF302239_1 Bud9 [Saccharomyces cerevisiae]
0.0 [1..547] [1..547]

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Predicted Domain #1
Region A:
Residues: [1-547]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTKITRDVSI TTENSKSTSG SATASSASLP ENDHPIFHQP RARIRSGSLF IEGSDSFPSS  60
   61 EVKSYNVYID DSKYSEILKG DTNSSSTDGK QVFEDARDDN FHQESHRDLE DSILDLVRRD 120
  121 PEVAAFPLPP PNSNERNRNS SNGSSAETNL NGHSSSGTIS TSVLLNMGSA EKHAGTTRGD 180
  181 HMESSSMKSF EKLGTRPSSL FYPPPEGTAP YQGPRATVSG NKSTRQTQGT YSFPSMRYGV 240
  241 DLVSPVEGAV DVAKSRVPNS TLNGTFPDKA FIPHEFQIPK KAWNRIPANK STSLKTPRNH 300
  301 SLLIDILKPF EAADLANDQR SSSAVLKNTV HSNGQYNPTN ETSGTRMQDQ RQKNTNEIDL 360
  361 EKIPNPQVPL GIAMDTMRSP NQLHEKEYES NIEAGLASGV GKGDNSIKQH QYKKIPQEID 420
  421 RDQQLSFQME TMPIQRIDSS SIRSFDSRIY GFSEIYSIPR VITTLCICLF VPPLFFFFSI 480
  481 NGNNGVSNYR LMRMIMNYEH RIGLLKGFEW DIDVQWFRTL CFVLGCIEML AIFASIGIGF 540
  541 GVGIIRE

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle