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View Structure Prediction Details

Protein: RPS25A
Organism: Saccharomyces cerevisiae
Length: 108 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for RPS25A.

Description E-value Query
Range
Subject
Range
gi|114572319 - gi|114572319|ref|XP_514173.2| PREDICTED: similar to ribosomal protein S25 [Pan troglodytes]
149.0 [0..6] [107..77]
gi|109018521 - gi|109018521|ref|XP_001108187.1| PREDICTED: similar to 40S ribosomal protein S25 [Macaca mulatta]
147.0 [0..6] [107..197]
gi|73955048 - gi|73955048|ref|XP_536549.2| PREDICTED: similar to 40S ribosomal protein S25 [Canis familiaris]
140.0 [0..1] [107..75]
gi|125778350, gi... - gi|54639683|gb|EAL29085.1| GA19768-PA [Drosophila pseudoobscura], gi|125778350|ref|XP_001359933.1| G...
139.0 [0..1] [108..1]
gi|108884721, gi... - gi|157103245|ref|XP_001647889.1| ribosomal protein S25, putative [Aedes aegypti], gi|157103243|ref|X...
134.0 [0..1] [108..83]
gi|47188265 - gi|47188265|emb|CAF87311.1| unnamed protein product [Tetraodon nigroviridis]
132.0 [0..1] [107..14]
gi|52346074, gi|... - gi|52346074|ref|NP_001005084.1| ribosomal protein S25 [Xenopus (Silurana) tropicalis], gi|50370198|g...
gi|147901123, gi... - gi|49670424|gb|AAH75187.1| MGC82151 protein [Xenopus laevis], gi|147901123|ref|NP_001086475.1| MGC82...
130.0 [0..1] [107..1]

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Predicted Domain #1
Region A:
Residues: [1-108]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPPKQQLSKA AKAAAALAGG KKSKKKWSKK SMKDRAQHAV ILDQEKYDRI LKEVPTYRYV  60
   61 SVSVLVDRLK IGGSLARIAL RHLEKEGIIK PISKHSKQAI YTRATASE

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 1.21
Match: 2j5oA
Description: No description for 2j5oA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle