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View Structure Prediction Details

Protein: HAH1
Organism: Saccharomyces cerevisiae
Length: 290 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for HAH1.

Description E-value Query
Range
Subject
Range
gi|190406951 - gi|190406951|gb|EDV10218.1| conserved hypothetical protein [Saccharomyces cerevisiae RM11-1a]
gi|207345228 - gi|207345228|gb|EDZ72117.1| YGR021Wp-like protein [Saccharomyces cerevisiae AWRI1631]
YG1D_YEAST - Probable transcriptional regulatory protein HAH1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S...
HAH1 - Putative protein of unknown function; the authentic, non-tagged protein is detected in highly purifi...
gi|151943306 - gi|151943306|gb|EDN61619.1| conserved protein [Saccharomyces cerevisiae YJM789]
0.0 [1..290] [1..290]
Y433_HAEI8 - Probable transcriptional regulatory protein NTHI0433 OS=Haemophilus influenzae (strain 86-028NP) GN=...
Y4390_HAEIG - Probable transcriptional regulatory protein CGSHiGG_04390 OS=Haemophilus influenzae (strain PittGG) ...
Y1480_HAEIE - Probable transcriptional regulatory protein CGSHiEE_01480 OS=Haemophilus influenzae (strain PittEE) ...
gi|145640259 - gi|145640259|ref|ZP_01795843.1| hypothetical protein CGSHiR3021_09380 [Haemophilus influenzae R3021]
gi|145272367, gi... - gi|145638772|ref|ZP_01794381.1| dATP pyrophosphohydrolase [Haemophilus influenzae PittII], gi|145272...
gi|144986761, gi... - gi|145632566|ref|ZP_01788300.1| hypothetical protein CGSHi3655_02089 [Haemophilus influenzae 3655], ...
gi|144979135, gi... - gi|145628665|ref|ZP_01784465.1| Holliday junction resolvase [Haemophilus influenzae 22.1-21], gi|144...
Y315_HAEIN - UPF0082 protein HI_0315 OS=Haemophilus influenzae GN=HI_0315 PE=1 SV=1
gi|53732943 - gi|53732943|ref|ZP_00155322.2| COG0217: Uncharacterized conserved protein [Haemophilus influenzae R2...
gi|53733202 - gi|53733202|ref|ZP_00156156.2| COG0217: Uncharacterized conserved protein [Haemophilus influenzae R2...
Y315_HAEIN - Probable transcriptional regulatory protein HI_0315 OS=Haemophilus influenzae (strain ATCC 51907 / D...
gi|145274845, gi... - gi|145640259|ref|ZP_01795843.1| hypothetical protein CGSHiR3021_09380 [Haemophilus influenzae R3021]...
gi|229810496, gi... - gi|229846403|ref|ZP_04466511.1| hypothetical protein CGSHi7P49H1_07020 [Haemophilus influenzae 7P49H...
2.0E-86 [26..286] [1..235]
Y980_PASMU - UPF0082 protein PM0980 OS=Pasteurella multocida GN=PM0980 PE=3 SV=1
Y980_PASMU - Probable transcriptional regulatory protein PM0980 OS=Pasteurella multocida (strain Pm70) GN=PM0980 ...
1.0E-85 [26..286] [1..235]
gi|15802277, gi|... - gi|15802277|ref|NP_288301.1| hypothetical protein Z2916 [Escherichia coli O157:H7 EDL933], gi|125159...
YEBC_ECOL6 - Probable transcriptional regulatory protein YebC OS=Escherichia coli O6:H1 (strain CFT073 / ATCC 700...
YEBC_ECOL6 - UPF0082 protein yebC OS=Escherichia coli O6 GN=yebC PE=3 SV=1
YEBC_ECO57 - Probable transcriptional regulatory protein YebC OS=Escherichia coli O157:H7 GN=yebC PE=3 SV=1
gi|227885708, gi... - gi|227885708|ref|ZP_04003513.1| conserved hypothetical protein [Escherichia coli 83972], gi|22783728...
gi|226900575, gi... - gi|237705818|ref|ZP_04536299.1| yebC [Escherichia sp. 3_2_53FAA], gi|226900575|gb|EEH86834.1| yebC [...
gi|242377585, gi... - gi|251785312|ref|YP_002999616.1| hypothetical protein B21_01823 [Escherichia coli BL21], gi|24237758...
gi|254288712, gi... - gi|254288712|ref|YP_003054460.1| hypothetical protein ECD_01835 [Escherichia coli BL21(DE3)], gi|253...
gi|115513140, gi... - gi|117624016|ref|YP_852929.1| hypothetical protein APECO1_914 [Escherichia coli APEC O1], gi|1155131...
gi|254161924, gi... - gi|254161924|ref|YP_003045032.1| hypothetical protein ECB_01835 [Escherichia coli B str. REL606], gi...
gi|254592888, gi... - gi|254793488|ref|YP_003078325.1| hypothetical protein ECSP_2438 [Escherichia coli O157:H7 str. TW143...
gi|75511835, gi|... - gi|75511835|ref|ZP_00734453.1| COG0217: Uncharacterized conserved protein [Escherichia coli 53638], ...
gi|75239715, gi|... - gi|75239715|ref|ZP_00723678.1| COG0217: Uncharacterized conserved protein [Escherichia coli F11], gi...
gi|157161333, gi... - gi|75195929|ref|ZP_00705999.1| COG0217: Uncharacterized conserved protein [Escherichia coli HS], gi|...
gi|157078967, gi... - gi|75190893|ref|ZP_00704160.1| COG0217: Uncharacterized conserved protein [Escherichia coli E24377A]...
gi|209767438, gi... - pir||B85799 hypothetical protein yebC [imported] - Escherichia coli (strain O157:H7, substrain EDL9...
gi|170683235, gi... - gi|170683235|ref|YP_001743380.1| hypothetical protein EcSMS35_1322 [Escherichia coli SMS-3-5], gi|17...
gi|168801900, gi... - gi|189376041|gb|EDU94457.1| conserved hypothetical protein [Escherichia coli O157:H7 str. EC508], gi...
gi|208810508, gi... - gi|208810508|ref|ZP_03252384.1| conserved hypothetical protein TIGR01033 [Escherichia coli O157:H7 s...
gi|195940290 - gi|195940290|ref|ZP_03085672.1| hypothetical protein EscherichcoliO157_28499 [Escherichia coli O157:...
gi|208820490, gi... - gi|208820490|ref|ZP_03260810.1| conserved hypothetical protein TIGR01033 [Escherichia coli O157:H7 s...
gi|208731253, gi... - gi|208816910|ref|ZP_03258030.1| conserved hypothetical protein TIGR01033 [Escherichia coli O157:H7 s...
gi|215265149, gi... - gi|215487077|ref|YP_002329508.1| hypothetical protein E2348C_1989 [Escherichia coli O127:H6 str. E23...
gi|209400343, gi... - gi|209400343|ref|YP_002270947.1| conserved hypothetical protein TIGR01033 [Escherichia coli O157:H7 ...
gi|188017405, gi... - gi|188017405|gb|EDU55527.1| conserved hypothetical protein [Escherichia coli O157:H7 str. EC4113], g...
gi|168762342, gi... - gi|189367318|gb|EDU85734.1| conserved hypothetical protein [Escherichia coli O157:H7 str. EC4501], g...
gi|189355163, gi... - gi|189355163|gb|EDU73582.1| conserved hypothetical protein [Escherichia coli O157:H7 str. EC4401], g...
gi|187768083, gi... - gi|187768083|gb|EDU31927.1| conserved hypothetical protein [Escherichia coli O157:H7 str. EC4196], g...
gi|168770847, gi... - gi|189360282|gb|EDU78701.1| conserved hypothetical protein [Escherichia coli O157:H7 str. EC4486], g...
gi|189370673, gi... - gi|189370673|gb|EDU89089.1| conserved hypothetical protein [Escherichia coli O157:H7 str. EC869], gi...
gi|168783164, gi... - gi|188999493|gb|EDU68479.1| conserved hypothetical protein [Escherichia coli O157:H7 str. EC4076], g...
gi|13362042, gi|... - gi|15831828|ref|NP_310601.1| hypothetical protein ECs2574 [Escherichia coli O157:H7 str. Sakai], gi|...
YEBC_ECOL5 - Probable transcriptional regulatory protein YebC OS=Escherichia coli O6:K15:H31 (strain 536 / UPEC) ...
YEBC_ECOUT - Probable transcriptional regulatory protein YebC OS=Escherichia coli (strain UTI89 / UPEC) GN=yebC P...
gi|218356116, gi... - gi|218548575|ref|YP_002382366.1| hypothetical protein EFER_1208 [Escherichia fergusonii ATCC 35469],...
gi|217318093, gi... - gi|217328746|ref|ZP_03444827.1| conserved hypothetical protein TIGR01033 [Escherichia coli O157:H7 s...
gi|218558729, gi... - gi|218558729|ref|YP_002391642.1| hypothetical protein ECS88_1922 [Escherichia coli S88], gi|21836549...
gi|218361220, gi... - gi|218554452|ref|YP_002387365.1| hypothetical protein ECIAI1_1951 [Escherichia coli IAI1], gi|218361...
gi|218695430, gi... - gi|218695430|ref|YP_002403097.1| hypothetical protein EC55989_2043 [Escherichia coli 55989], gi|2183...
gi|218689802, gi... - gi|218689802|ref|YP_002398014.1| hypothetical protein ECED1_2069 [Escherichia coli ED1a], gi|2184273...
gi|218705365, gi... - gi|218705365|ref|YP_002412884.1| hypothetical protein ECUMN_2162 [Escherichia coli UMN026], gi|21843...
gi|218369550, gi... - gi|218699564|ref|YP_002407193.1| hypothetical protein ECIAI39_1185 [Escherichia coli IAI39], gi|2183...
2.0E-85 [26..286] [1..235]
gi|238860331, gi... - gi|238901079|ref|YP_002926875.1| hypothetical protein BWG_1678 [Escherichia coli BW2952], gi|2388603...
YEBC_ECOLI - UPF0082 protein yebC - Escherichia coli
YEBC_SHIFL - Probable transcriptional regulatory protein YebC OS=Shigella flexneri GN=yebC PE=3 SV=1
gi|30063274, gi|... - gi|30063274|ref|NP_837445.1| hypothetical protein S1940 [Shigella flexneri 2a str. 2457T], gi|300415...
EG11137 - UPF0082 family protein / Function unknown, expressed protein, UPF0082 family
gi|75255879, gi|... - gi|75255879|ref|ZP_00727618.1| COG0217: Uncharacterized conserved protein [Escherichia coli E22], gi...
YEBC_SHISS - Probable transcriptional regulatory protein YebC OS=Shigella sonnei (strain Ss046) GN=yebC PE=3 SV=1
gi|169754719, gi... - gi|170019791|ref|YP_001724745.1| hypothetical protein EcolC_1768 [Escherichia coli ATCC 8739], gi|16...
EG11137 - UPF0082 family protein / Function unknown, expressed protein, UPF0082 family
gi|1736511, gi|8... - gi|89108704|ref|AP_002484.1| hypothetical protein [Escherichia coli str. K-12 substr. W3110], gi|173...
gi|169889355, gi... - gi|170081520|ref|YP_001730840.1| hypothetical protein ECDH10B_2005 [Escherichia coli str. K-12 subst...
gi|124498810, gi... - gi|124531071|ref|ZP_01701456.1| protein of unknown function DUF28 [Escherichia coli B], gi|124498810...
gi|209912490, gi... - gi|209919231|ref|YP_002293315.1| hypothetical protein ECSE_2040 [Escherichia coli SE11], gi|20991249...
gi|75209090, gi|... - gi|75209090|ref|ZP_00709345.1| COG0217: Uncharacterized conserved protein [Escherichia coli B171], g...
gi|195182926 - gi|195182926|dbj|BAG66494.1| hypothetical protein [Escherichia coli O111:H-]
gi|191168081, gi... - gi|75228754|ref|ZP_00715367.1| COG0217: Uncharacterized conserved protein [Escherichia coli B7A], gi...
gi|194422011, gi... - gi|83585535|ref|ZP_00924179.1| COG0217: Uncharacterized conserved protein [Escherichia coli 101-1], ...
3.0E-85 [26..286] [1..235]
gi|194711929, gi... - gi|194736427|ref|YP_002114934.1| hypothetical protein SeSA_A2053 [Salmonella enterica subsp. enteric...
YEBC_SALTY - UPF0082 protein yebC OS=Salmonella typhimurium GN=yebC PE=3 SV=1
gi|194469640, gi... - gi|194469640|ref|ZP_03075624.1| conserved hypothetical protein [Salmonella enterica subsp. enterica ...
gi|194444208, gi... - gi|194444208|ref|YP_002041164.1| hypothetical protein SNSL254_A2058 [Salmonella enterica subsp. ente...
gi|205342638, gi... - gi|205342638|gb|EDZ29402.1| conserved hypothetical protein [Salmonella enterica subsp. enterica sero...
gi|29141459, gi|... - gi|29141459|ref|NP_804801.1| hypothetical protein t0978 [Salmonella enterica subsp. enterica serovar...
gi|198244624, gi... - gi|198244624|ref|YP_002215186.1| conserved hypothetical protein TIGR01033 [Salmonella enterica subsp...
gi|16760849 - gi|16760849|ref|NP_456466.1| hypothetical protein STY2107 [Salmonella enterica subsp. enterica serov...
gi|197362108, gi... - gi|197362108|ref|YP_002141745.1| hypothetical protein SSPA0904 [Salmonella enterica subsp. enterica ...
YEBC_SALTI - UPF0082 protein yebC OS=Salmonella typhi GN=yebC PE=3 SV=1
YEBC_SALTI - Probable transcriptional regulatory protein YebC OS=Salmonella typhi GN=yebC PE=3 SV=1
gi|197264424, gi... - gi|197264424|ref|ZP_03164498.1| conserved hypothetical protein [Salmonella enterica subsp. enterica ...
YEBC_SALTY - Probable transcriptional regulatory protein YebC OS=Salmonella typhimurium (strain LT2 / SGSC1412 / ...
gi|197250988, gi... - gi|197250988|ref|YP_002146123.1| hypothetical protein SeAg_B1224 [Salmonella enterica subsp. enteric...
gi|205327899, gi... - gi|205327899|gb|EDZ14663.1| conserved hypothetical protein [Salmonella enterica subsp. enterica sero...
gi|205322905, gi... - gi|205322905|gb|EDZ10744.1| conserved hypothetical protein [Salmonella enterica subsp. enterica sero...
gi|161613545, gi... - gi|161613545|ref|YP_001587510.1| hypothetical protein SPAB_01265 [Salmonella enterica subsp. enteric...
gi|168462569, gi... - gi|195633896|gb|EDX52248.1| conserved hypothetical protein [Salmonella enterica subsp. enterica sero...
YEBC_SALTY - UPF0082 protein yebC OS=Salmonella typhimurium GN=yebC PE=3 SV=1
gi|205350673, gi... - gi|205350673|gb|EDZ37304.1| conserved hypothetical protein [Salmonella enterica subsp. enterica sero...
gi|197288645, gi... - gi|197288645|gb|EDY28020.1| conserved hypothetical protein [Salmonella enterica subsp. enterica sero...
gi|168234039, gi... - gi|205331992|gb|EDZ18756.1| conserved hypothetical protein [Salmonella enterica subsp. enterica sero...
gi|213426400 - gi|213426400|ref|ZP_03359150.1| hypothetical protein SentesTyphi_12659 [Salmonella enterica subsp. e...
gi|206708383, gi... - gi|207856580|ref|YP_002243231.1| hypothetical protein SEN1104 [Salmonella enterica subsp. enterica s...
gi|205272176, gi... - gi|205352395|ref|YP_002226196.1| hypothetical protein SG1153 [Salmonella enterica subsp. enterica se...
gi|199602746, gi... - gi|200390301|ref|ZP_03216912.1| conserved hypothetical protein TIGR01033 [Salmonella enterica subsp....
gi|213855275 - gi|213855275|ref|ZP_03383515.1| hypothetical protein SentesT_14892 [Salmonella enterica subsp. enter...
gi|213649295 - gi|213649295|ref|ZP_03379348.1| hypothetical protein SentesTy_19640 [Salmonella enterica subsp. ente...
YEBC_SALPA - Probable transcriptional regulatory protein YebC OS=Salmonella paratyphi A (strain ATCC 9150 / SARB4...
gi|238912041 - gi|238912041|ref|ZP_04655878.1| hypothetical protein SentesTe_13046 [Salmonella enterica subsp. ente...
YEBC_SALPA - UPF0082 protein yebC OS=Salmonella paratyphi A GN=yebC PE=3 SV=1
lcl|NC_016856.1_... - [gene=yebC] [protein=hypothetical protein] [protein_id=YP_005237863.1] [location=complement(2005190....
4.0E-85 [26..286] [1..235]
YU82_CLOHI - Probable transcriptional regulatory protein ORF2U OS=Clostridium histolyticum PE=3 SV=1
1.0E-84 [26..287] [1..238]
gi|218929162, gi... - gi|218929162|ref|YP_002347037.1| hypothetical protein YPO2055 [Yersinia pestis CO92], gi|16122294|re...
Y1437_YERPA - Probable transcriptional regulatory protein YPA_1437 OS=Yersinia pestis bv. Antiqua (strain Antiqua)...
Y2038_YERPS - Probable transcriptional regulatory protein YPTB2038 OS=Yersinia pseudotuberculosis serotype I (stra...
Y1532_YERPN - Probable transcriptional regulatory protein YPN_1532 OS=Yersinia pestis bv. Antiqua (strain Nepal516...
Y2424_YERPG - Probable transcriptional regulatory protein YpAngola_A2424 OS=Yersinia pestis bv. Antiqua (strain An...
Y2033_YERP3 - Probable transcriptional regulatory protein YpsIP31758_2033 OS=Yersinia pseudotuberculosis serotype ...
gi|89104243, gi|... - gi|89104243|ref|ZP_01176792.1| COG0217: Uncharacterized conserved protein [Yersinia pestis biovar Or...
gi|167424796, gi... - gi|167424796|ref|ZP_02316549.1| conserved hypothetical protein TIGR01033 [Yersinia pestis biovar Med...
gi|167420405, gi... - gi|167420405|ref|ZP_02312158.1| conserved hypothetical protein TIGR01033 [Yersinia pestis biovar Ori...
Y2097_YERPB - Probable transcriptional regulatory protein YPTS_2097 OS=Yersinia pseudotuberculosis serotype IB (st...
gi|229894769, gi... - gi|229894769|ref|ZP_04509949.1| conserved protein [Yersinia pestis Pestoides A], gi|229702242|gb|EEO...
gi|229897471, gi... - gi|229897471|ref|ZP_04512627.1| conserved protein [Yersinia pestis biovar Orientalis str. PEXU2], gi...
gi|229898118, gi... - gi|229898118|ref|ZP_04513267.1| conserved protein [Yersinia pestis biovar Orientalis str. India 195]...
Y2038_YERPS - UPF0082 protein YPTB2038 OS=Yersinia pseudotuberculosis GN=YPTB2038 PE=3 SV=1
gi|161511392 - gi|161511392|ref|NP_993239.2| hypothetical protein YP_1898 [Yersinia pestis biovar Microtus str. 910...
gi|161484794 - gi|161484794|ref|NP_669564.2| hypothetical protein y2255 [Yersinia pestis KIM]
gi|165991759, gi... - gi|166009204|ref|ZP_02230102.1| conserved hypothetical protein TIGR01033 [Yersinia pestis biovar Ant...
Y2055_YERPE - Probable transcriptional regulatory protein YPO2055/y2255/YP_1898 OS=Yersinia pestis GN=YPO2055 PE=3...
gi|165921630, gi... - gi|165926409|ref|ZP_02222241.1| conserved hypothetical protein TIGR01033 [Yersinia pestis biovar Ori...
gi|167401361, gi... - gi|167401361|ref|ZP_02306858.1| conserved hypothetical protein TIGR01033 [Yersinia pestis biovar Ant...
gi|166211114, gi... - gi|166211114|ref|ZP_02237149.1| conserved hypothetical protein TIGR01033 [Yersinia pestis biovar Ant...
gi|149366016, gi... - gi|149366016|ref|ZP_01888051.1| hypothetical protein YPE_1201 [Yersinia pestis CA88-4125], gi|149292...
Y1067_YERPP - Probable transcriptional regulatory protein YPDSF_1067 OS=Yersinia pestis (strain Pestoides F) GN=YP...
5.0E-84 [26..286] [1..236]
gi|224501525 - gi|224501525|ref|ZP_03669832.1| hypothetical protein LmonFR_03242 [Listeria monocytogenes FSL R2-561...
Y1535_LISMO - Probable transcriptional regulatory protein lmo1535 OS=Listeria monocytogenes serovar 1/2a (strain A...
gi|153174694, gi... - gi|254828231|ref|ZP_05232918.1| hypothetical protein LmonocytogeFSL_07197 [Listeria monocytogenes FS...
gi|224499804 - gi|224499804|ref|ZP_03668153.1| hypothetical protein LmonF1_09014 [Listeria monocytogenes Finland 19...
Y1535_LISMO, YF3... - (Q8Y6Z5) Hypothetical UPF0082 protein lmo1535, UPF0082 protein lmo1535 OS=Listeria monocytogenes GN=...
2.0E-83 [26..287] [1..238]
gi|17982216, gi|... - gi|17986604|ref|NP_539238.1| hypothetical protein BMEI0321 [Brucella melitensis 16M], gi|17982216|gb...
gi|25318120 - gi|25318120|pir||AC3292 glucose-1-phosphate adenylyltransferase (EC 2.7.7.27) [imported] - Brucella ...
4.0E-83 [22..286] [4..242]

Back

Predicted Domain #1
Region A:
Residues: [1-41]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLVRNRYLGE LLKNSRSFSV LNSSVRSGHN KWSTIKHGKA K

[Run NCBI BLAST on this sequence.]

Region B:
Residues: [114-290]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 ELCVYEGMGP GGVAIVVEAL TDNKNRTIGL IRSAFNKANG SMTPTLFFFD KKGYVTMVPP  60
   61 KMLDTEDKVL ESVLEIQGIE DIAPVQEDAE DLECDTETET TGQTYEAVME PADTNKVAAL 120
  121 LKERGFHIRD LGIGYNAKPD MEVFVQGDET LEKLQKLTTA LEDIDEVTSL YTNASNA

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 378.08661
Match: 1lfpA_
Description: Hypothetical protein aq1575
Matching Structure (courtesy of the PDB):

Predicted Domain #2
Region A:
Residues: [42-113]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NDAERNKINN KFANQIAMSV KLGNGITDPS MNIRLATSIE LANKNNVSKK VIENAIRKAS  60
   61 GSSASGKDSN AS

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 378.08661
Match: 1lfpA_
Description: Hypothetical protein aq1575
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle