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View Structure Prediction Details

Protein: ZRT1
Organism: Saccharomyces cerevisiae
Length: 376 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ZRT1.

Description E-value Query
Range
Subject
Range
ZRT1 - High-affinity zinc transporter of the plasma membrane, responsible for the majority of zinc uptake; ...
ZRT1_YEAST - Zinc-regulated transporter 1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=ZRT1 PE=1 S...
4.0E-75 [1..376] [1..376]
ZIP7_ARATH - Zinc transporter 7 OS=Arabidopsis thaliana GN=ZIP7 PE=2 SV=1
8.0E-65 [5..376] [11..365]
gi|14582255 - gi|14582255|gb|AAK69429.1|AF275751_1 ZIP-like zinc transporter [Thlaspi caerulescens]
4.0E-62 [12..376] [23..408]
gi|9716482, gi|4... - gi|9716482|gb|AAF97510.1|AF246266_2 iron-regulated transporter 2 [Lycopersicon esculentum], gi|48367...
4.0E-61 [15..376] [15..352]
gi|7507776 - gi|7507776|pir||T16867 probable cytochrome P450 T13C5.1 [similarity] - Caenorhabditis elegans
1.0E-60 [25..376] [23..348]

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Predicted Domain #1
Region A:
Residues: [1-193]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSNVTTPWWK QWDPSEVTLA DKTPDDVWKT CVLQGVYFGG NEYNGNLGAR ISSVFVILFV  60
   61 STFFTMFPLI STKVKRLRIP LYVYLFAKYF GSGVIVATAF IHLMDPAYGA IGGTTCVGQT 120
  121 GNWGLYSWCP AIMLTSLTFT FLTDLFSSVW VERKYGLSHD HTHDEIKDTV VRNTAAVSSE 180
  181 NDNENGTANG SHD

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [194-376]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 TKNGVEYYED SDATSMDVVQ SFQAQFYAFL ILEFGVIFHS VMIGLNLGSV GDEFSSLYPV  60
   61 LVFHQSFEGL GIGARLSAIE FPRSKRWWPW ALCVAYGLTT PICVAIGLGV RTRYVSGSYT 120
  121 ALVISGVLDA ISAGILLYTG LVELLARDFI FNPQRTKDLR ELSFNVICTL FGAGIMALIG 180
  181 KWA

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 54.744727
Match: PF02535
Description: ZIP Zinc transporter

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle