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View Structure Prediction Details

Protein: ZRT1
Organism: Saccharomyces cerevisiae
Length: 376 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ZRT1.

Description E-value Query
Range
Subject
Range
ZRT1 - High-affinity zinc transporter of the plasma membrane, responsible for the majority of zinc uptake; ...
ZRT1_YEAST - Zinc-regulated transporter 1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=ZRT1 PE=1 S...
4.0E-75 [1..376] [1..376]
ZIP7_ARATH - Zinc transporter 7 OS=Arabidopsis thaliana GN=ZIP7 PE=2 SV=1
8.0E-65 [5..376] [11..365]
gi|14582255 - gi|14582255|gb|AAK69429.1|AF275751_1 ZIP-like zinc transporter [Thlaspi caerulescens]
4.0E-62 [12..376] [23..408]
gi|9716482, gi|4... - gi|9716482|gb|AAF97510.1|AF246266_2 iron-regulated transporter 2 [Lycopersicon esculentum], gi|48367...
4.0E-61 [15..376] [15..352]
gi|7507776 - gi|7507776|pir||T16867 probable cytochrome P450 T13C5.1 [similarity] - Caenorhabditis elegans
1.0E-60 [25..376] [23..348]

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Predicted Domain #1
Region A:
Residues: [1-193]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSNVTTPWWK QWDPSEVTLA DKTPDDVWKT CVLQGVYFGG NEYNGNLGAR ISSVFVILFV  60
   61 STFFTMFPLI STKVKRLRIP LYVYLFAKYF GSGVIVATAF IHLMDPAYGA IGGTTCVGQT 120
  121 GNWGLYSWCP AIMLTSLTFT FLTDLFSSVW VERKYGLSHD HTHDEIKDTV VRNTAAVSSE 180
  181 NDNENGTANG SHD

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [194-376]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 TKNGVEYYED SDATSMDVVQ SFQAQFYAFL ILEFGVIFHS VMIGLNLGSV GDEFSSLYPV  60
   61 LVFHQSFEGL GIGARLSAIE FPRSKRWWPW ALCVAYGLTT PICVAIGLGV RTRYVSGSYT 120
  121 ALVISGVLDA ISAGILLYTG LVELLARDFI FNPQRTKDLR ELSFNVICTL FGAGIMALIG 180
  181 KWA

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 54.744727
Match: PF02535
Description: ZIP Zinc transporter

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle