| Protein: | BUD13 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 266 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for BUD13.
| Description | E-value | Query Range |
Subject Range |
|
|
4.0E-78 | [1..266] | [1..266] |
|
|
2.0E-59 | [1..260] | [6..299] |
|
|
2.0E-51 | [32..260] | [296..554] |
|
|
3.0E-45 | [16..261] | [346..631] |
|
|
1.0E-42 | [15..261] | [343..613] |
|
|
4.0E-37 | [13..266] | [177..457] |
|
|
0.001 | [102..183] | [1069..1149] |
|
Region A: Residues: [1-74] |
1 11 21 31 41 51
| | | | | |
1 MALHQYLSET YGPTKPKNKT KKKKKESKSD ANSDKTSLIV KERLSTLQQE QEKSGVASFS 60
61 KFDKQKSKNI WKNL
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.795 | 0.883 | nucleus | a.74.1 | Cyclin-like |
| View | Download | 0.497 | 0.883 | nucleus | a.52.1 | Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin |
| View | Download | 0.588 | 0.883 | nucleus | a.74.1 | Cyclin-like |
| View | Download | 0.475 | 0.883 | nucleus | a.52.1 | Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin |
| View | Download | 0.441 | 0.883 | nucleus | a.74.1 | Cyclin-like |
| View | Download | 0.349 | 0.883 | nucleus | a.151.1 | Glutamyl tRNA-reductase dimerization domain |
| View | Download | 0.340 | 0.883 | nucleus | a.64.1 | Saposin |
| View | Download | 0.324 | 0.883 | nucleus | a.76.1 | Iron-dependent represor protein, dimerization domain |
| View | Download | 0.308 | 0.883 | nucleus | a.4.1 | Homeodomain-like |
| View | Download | 0.306 | 0.883 | nucleus | a.77.1 | DEATH domain |
| View | Download | 0.304 | 0.883 | nucleus | a.64.1 | Saposin |
| View | Download | 0.301 | 0.883 | nucleus | a.130.1 | Chorismate mutase II |
| View | Download | 0.280 | 0.883 | nucleus | a.23.5 | Hemolysin expression modulating protein HHA |
| View | Download | 0.273 | 0.883 | nucleus | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.267 | 0.883 | nucleus | a.27.1 | Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases |
| View | Download | 0.266 | 0.883 | nucleus | a.7.1 | Spectrin repeat |
| View | Download | 0.258 | 0.883 | nucleus | a.48.3 | Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 |
| View | Download | 0.256 | 0.883 | nucleus | a.48.3 | Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 |
| View | Download | 0.255 | 0.883 | nucleus | a.4.1 | Homeodomain-like |
| View | Download | 0.249 | 0.883 | nucleus | g.2.2 | Neurotoxin B-IV |
| View | Download | 0.248 | 0.883 | nucleus | d.109.1 | Actin depolymerizing proteins |
| View | Download | 0.236 | 0.883 | nucleus | a.12.1 | Kix domain of CBP (creb binding protein) |
| View | Download | 0.234 | 0.883 | nucleus | a.29.4 | RecG, N-terminal domain |
| View | Download | 0.224 | 0.883 | nucleus | a.23.1 | HSC20 (HSCB), C-terminal oligomerisation domain |
| View | Download | 0.222 | 0.883 | nucleus | a.2.6 | Effector domain of the protein kinase pkn/prk1 |
| View | Download | 0.219 | 0.883 | nucleus | a.65.1 | Annexin |
| View | Download | 0.215 | 0.883 | nucleus | a.16.1 | S15/NS1 RNA-binding domain |
| View | Download | 0.210 | 0.883 | nucleus | a.46.1 | Methionine synthase domain |
| View | Download | 0.208 | 0.883 | nucleus | a.12.1 | Kix domain of CBP (creb binding protein) |
| View | Download | 0.207 | 0.883 | nucleus | a.48.3 | Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 |
| View | Download | 0.201 | 0.883 | nucleus | a.4.1 | Homeodomain-like |
|
Region A: Residues: [75-187] |
1 11 21 31 41 51
| | | | | |
1 ETNELSHAIT HPSASSITGN ESKNDLKEIR AQEPLVTVAD KSKTRKTIYR DAQGHKIQED 60
61 SKIDDSSFSR SKYEDEKAAE REQYLKNLNM GDVQKLGINV DAHDKKKNQT ASS
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.281 | 0.434 | nucleus | a.29.2 | Bromodomain |
| View | Download | 0.214 | 0.334 | nucleus | d.93.1 | SH2 domain |
| View | Download | 0.211 | 0.002 | nucleus | b.60.1 | Lipocalins |
| View | Download | 0.233 | 0.000 | nucleus | a.24.3 | Cytochromes |
| View | Download | 0.203 | 0.000 | nucleus | c.55.4 | Translational machinery components |
|
Region A: Residues: [188-266] |
1 11 21 31 41 51
| | | | | |
1 LTIEDPAITF THDKERTVKT SLLGRKLYDK PAPENRFAIM PGSRWDGVHR SNGFEEKWFA 60
61 KQNEINEKKV QSYTLQEDY
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.318 | a.74.1 | Cyclin-like |
| View | Download | 0.222 | d.93.1 | SH2 domain |
| View | Download | 0.211 | a.130.1 | Chorismate mutase II |
| View | Download | 0.395 | a.77.1 | DEATH domain |
