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View Structure Prediction Details

Protein: RPL9A
Organism: Saccharomyces cerevisiae
Length: 191 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for RPL9A.

Description E-value Query
Range
Subject
Range
gi|7507776 - gi|7507776|pir||T16867 probable cytochrome P450 T13C5.1 [similarity] - Caenorhabditis elegans
8.0E-58 [1..189] [1..189]
gi|57706 - gi|57706|emb|CAA36002.1| unnamed protein product [Rattus rattus]
RL9_RAT - 60S ribosomal protein L9 OS=Rattus norvegicus GN=Rpl9 PE=1 SV=1
3.0E-57 [1..189] [1..189]
RL9_MOUSE - 60S ribosomal protein L9 OS=Mus musculus GN=Rpl9 PE=1 SV=2
5.0E-57 [1..189] [1..189]
RL9_ICTPU - 60S ribosomal protein L9 OS=Ictalurus punctatus GN=rpl9 PE=2 SV=1
3.0E-56 [1..189] [1..189]
gi|2058273 - gi|2058273|dbj|BAA19798.1| YK426 [Oryza sativa (japonica cultivar-group)]
RL9_ORYSA - (P49210) 60S ribosomal protein L9
1.0E-52 [1..190] [1..189]
FBpp0309201, RpL... - The gene Ribosomal protein L9 is referred to in FlyBase by the symbol Dmel\RpL9 (CG6141, FBgn0015756...
gi|195578409, gi... - gi|195578409|ref|XP_002079058.1| GD22204 [Drosophila simulans], gi|194191067|gb|EDX04643.1| GD22204 ...
gi|194130497, gi... - gi|195340025|ref|XP_002036617.1| GM11214 [Drosophila sechellia], gi|194130497|gb|EDW52540.1| GM11214...
2.0E-50 [1..189] [1..187]
gi|3355662 - gi|3355662|emb|CAA08792.1| ribosomal protein L9 [Podocoryne carnea]
3.0E-50 [6..188] [1..180]

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Predicted Domain #1
Region A:
Residues: [1-84]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKYIQTEQQI EVPEGVTVSI KSRIVKVVGP RGTLTKNLKH IDVTFTKVNN QLIKVAVHNG  60
   61 GRKHVAALRT VKSLVDNMIT GVTK

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 916.373389
Match: 1k5yH_
Description: No description for 1k5yH_ was found.

Predicted Domain #2
Region A:
Residues: [85-191]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GYKYKMRYVY AHFPINVNIV EKDGAKFIEV RNFLGDKKIR NVPVRDGVTI EFSTNVKDEI  60
   61 VLSGNSVEDV SQNAADLQQI CRVRNKDIRK FLDGIYVSHK GFITEDL

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 916.373389
Match: 1k5yH_
Description: No description for 1k5yH_ was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle