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View Structure Prediction Details

Protein: BRP1
Organism: Saccharomyces cerevisiae
Length: 125 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

No multiple sequence alignment data found for BRP1.

Predicted Domain #1
Region A:
Residues: [1-125]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMEKEGKKPE RHMDNILKMS IPVKSMSEVS RPGSAALGNT DAMRASLRNS RRSFSGHVRL  60
   61 VLRLVYGFIS AVIIAGSPLR DRVCFQITGK GQAKQSDVWV IPAMPVYVSP FQEACFVFSP 120
  121 SAMVT

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

    MCM
Score
SCOP
Match
SCOP Description
View Download 0.616 a.118.1 ARM repeat
View Download 0.616 a.118.1 ARM repeat
View Download 0.473 f.1.4 Bcl-2 inhibitors of programmed cell death
View Download 0.452 a.133.1 Phospholipase A2, PLA2
View Download 0.452 a.133.1 Phospholipase A2, PLA2
View Download 0.424 c.23.6 Cobalamin (vitamin B12)-binding domain
View Download 0.424 c.23.6 Cobalamin (vitamin B12)-binding domain
View Download 0.388 a.24.18 Description not found.
View Download 0.317 a.74.1 Cyclin-like
View Download 0.281 d.55.1 Ribosomal protein L22


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle