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View Structure Prediction Details

Protein: CNN1
Organism: Saccharomyces cerevisiae
Length: 361 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CNN1.

Description E-value Query
Range
Subject
Range
gi|190406621 - gi|190406621|gb|EDV09888.1| kinetochore protein [Saccharomyces cerevisiae RM11-1a]
gi|151940810 - gi|151940810|gb|EDN59197.1| kinetochore protein [Saccharomyces cerevisiae YJM789]
gi|207345613 - gi|207345613|gb|EDZ72378.1| YFR046Cp-like protein [Saccharomyces cerevisiae AWRI1631]
CNN1 - Kinetochore protein of unknown function; associated with the essential kinetochore proteins Nnf1p an...
CNN1_YEAST - Kinetochore-associated protein CNN1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=CNN1...
0.0 [1..361] [1..361]

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Predicted Domain #1
Region A:
Residues: [1-361]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSTPRKAAGN NENTEVSEIR TPFRERALEE QRLKDEVLIR NTPGYRKLLS ASTKSHDILN  60
   61 KDPNEVRSFL QDLSQVLARK SQGNDTTTNK TQARNLIDEL AYEESQPEEN ELLRSRSEKL 120
  121 TDNNIGNETQ PDYTSLSQTV FAKLQERDKG LKSRKIDPII IQDVPTTGHE DELTVHSPDK 180
  181 ANSISMEVLR TSPSIGMDQV DEPPVRDPVP ISITQQEEPL SEDLPSDDKE ETEEAENEDY 240
  241 SFENTSDENL DDIGNDPIRL NVPAVRRSSI KPLQIMDLKH LTRQFLNENR IILPKQTWST 300
  301 IQEESLNIMD FLKQKIGTLQ KQELVDSFID MGIINNVDDM FELAHELLPL ELQSRIESYL 360
  361 F

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle