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View Structure Prediction Details

Protein: YFL065C
Organism: Saccharomyces cerevisiae
Length: 102 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for YFL065C.

Description E-value Query
Range
Subject
Range
gi|642318, gi|64... - gi|927529|emb|CAA90550.1| unknown [Saccharomyces cerevisiae], gi|642318|emb|CAA87991.1| ORF L0532 [S...
205.0 [0..1] [102..170]

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Predicted Domain #1
Region A:
Residues: [1-102]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRTFTDFVSG APIVRSLQKS TIRKYGYNLA PHMFLLLHVD ELSIFSAYQA SLPGEKKVDT  60
   61 ERLKRDLCPR KPIEIKYFSQ ICNDMMNKKD RLGDVLRVCC PS

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

    MCM
Score
SCOP
Match
SCOP Description
View Download 0.589 a.60.9 lambda integrase-like, N-terminal domain
View Download 0.587 a.4.5 "Winged helix" DNA-binding domain
View Download 0.587 a.4.5 "Winged helix" DNA-binding domain
View Download 0.540 g.52.1 Inhibitor of apoptosis (IAP) repeat
View Download 0.540 g.52.1 Inhibitor of apoptosis (IAP) repeat
View Download 0.532 a.4.5 "Winged helix" DNA-binding domain
View Download 0.532 a.4.5 "Winged helix" DNA-binding domain
View Download 0.525 a.61.1 Retroviral matrix proteins


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle