| Protein: | CDC4 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 779 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CDC4.
| Description | E-value | Query Range |
Subject Range |
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0.0 | [1..779] | [1..779] |
|
|
0.0 | [183..777] | [842..1476] |
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0.0 | [220..774] | [797..1314] |
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Region A: Residues: [1-107] |
1 11 21 31 41 51
| | | | | |
1 MGSFPLAEFP LRDIPVPYSY RVSGGIASSG SVTALVTAAG THRNSSTAKT VETEDGEEDI 60
61 DEYQRKRAAG SGESTPERSD FKRVKHDNHK TLHPVNLQNT GAASVDN
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [108-450] |
1 11 21 31 41 51
| | | | | |
1 DGLHNLTDIS NDAEKLLMSV DDGSAAPSTL SVNMGVASHN VAAPTTVNAA TITGSDVSNN 60
61 VNSATINNPM EEGALPLSPT ASSPGTTTPL AKTTKTINNN NNIADLIESK DSIISPEYLS 120
121 DEIFSAINNN LPHAYFKNLL FRLVANMDRS ELSDLGTLIK DNLKRDLITS LPFEISLKIF 180
181 NYLQFEDIIN SLGVSQNWNK IIRKSTSLWK KLLISENFVS PKGFNSLNLK LSQKYPKLSQ 240
241 QDRLRLSFLE NIFILKNWYN PKFVPQRTTL RGHMTSVITC LQFEDNYVIT GADDKMIRVY 300
301 DSINKKFLLQ LSGHDGGVWA LKYAHGGILV SGSTDRTVRV WDI
|
| Detection Method: | |
| Confidence: | 27.39794 |
| Match: | 1gxrA_ |
| Description: | Groucho/tle1, C-terminal domain |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [451-601] |
1 11 21 31 41 51
| | | | | |
1 KKGCCTHVFK GHNSTVRCLD IVEYKNIKYI VTGSRDNTLH VWKLPKESSV PDHGEEHDYP 60
61 LVFHTPEENP YFVGVLRGHM ASVRTVSGHG NIVVSGSYDN TLIVWDVAQM KCLYILSGHT 120
121 DRIYSTIYDH ERKRCISASM DTTIRIWDLE N
|
| Detection Method: | |
| Confidence: | 225.9794 |
| Match: | 1erjA_ |
| Description: | Tup1, C-terminal domain |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [602-779] |
1 11 21 31 41 51
| | | | | |
1 IWNNGECSYA TNSASPCAKI LGAMYTLQGH TALVGLLRLS DKFLVSAAAD GSIRGWDAND 60
61 YSRKFSYHHT NLSAITTFYV SDNILVSGSE NQFNIYNLRS GKLVHANILK DADQIWSVNF 120
121 KGKTLVAAVE KDGQSFLEIL DFSKASKINY VSNPVNSSSS SLESISTSLG LTRTTIIP
|
| Detection Method: | |
| Confidence: | 14.28 |
| Match: | 1jjuB |
| Description: | Quinohemoprotein amine dehydrogenase B chain |
Matching Structure (courtesy of the PDB): |
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