Protein: | BUR6 |
Organism: | Saccharomyces cerevisiae |
Length: | 142 amino acids |
Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for BUR6.
Description | E-value | Query Range |
Subject Range |
|
2.0E-39 | [22..141] | [1..114] |
|
9.0E-39 | [22..141] | [1..114] |
|
2.0E-38 | [32..141] | [1..110] |
|
2.0E-38 | [22..141] | [1..114] |
|
3.0E-38 | [22..141] | [1..114] |
|
4.0E-38 | [22..141] | [1..114] |
Region A: Residues: [1-142] |
1 11 21 31 41 51 | | | | | | 1 MADQVPVTTQ LPPIKPEHEV PLDAGGSPVG NMGTNSNNNN ELGDVFDRIK THFPPAKVKK 60 61 IMQTDEDIGK VSQATPVIAG RSLEFFIALL VKKSGEMARG QGTKRITAEI LKKTILNDEK 120 121 FDFLREGLCV EEGQTQPEEE SA |
Detection Method: | |
Confidence: | 126.9794 |
Match: | 1jfiA_ |
Description: | Negative cofactor 2, NC2, alpha chain |
Matching Structure (courtesy of the PDB): |
Term | Confidence | Notes |
DNA binding | 4.49118409263799 | bayes_pls_golite062009 |
nucleic acid binding | 4.35201412176948 | bayes_pls_golite062009 |
transcription regulator activity | 4.08606081850613 | bayes_pls_golite062009 |
RNA polymerase II transcription factor activity | 3.28941584139552 | bayes_pls_golite062009 |
binding | 3.27510691458843 | bayes_pls_golite062009 |
general RNA polymerase II transcription factor activity | 2.99199798564473 | bayes_pls_golite062009 |
transcription activator activity | 2.58408368884371 | bayes_pls_golite062009 |
transcription factor activity | 2.51581622888695 | bayes_pls_golite062009 |
transcription repressor activity | 2.3574713307436 | bayes_pls_golite062009 |
protein binding | 2.1291876005999 | bayes_pls_golite062009 |
transcription corepressor activity | 1.30859203490073 | bayes_pls_golite062009 |
sequence-specific DNA binding | 1.18653213156155 | bayes_pls_golite062009 |
transcription factor binding | 1.15204005455906 | bayes_pls_golite062009 |
transcription cofactor activity | 1.01502031330902 | bayes_pls_golite062009 |
transcription coactivator activity | 0.0885263144317296 | bayes_pls_golite062009 |