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View Structure Prediction Details

Protein: YER158C
Organism: Saccharomyces cerevisiae
Length: 573 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for YER158C.

Description E-value Query
Range
Subject
Range
YEY8_YEAST - Uncharacterized protein YER158C OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YER158C ...
YER158C - Protein of unknown function, has similarity to Afr1p; potentially phosphorylated by Cdc28p
0.0 [1..573] [1..573]

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Predicted Domain #1
Region A:
Residues: [1-417]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLQQGSSSRR SLHGNDFHTL TSPSRRDSLS IPRAVDARSA STIDLFYIPD ATVSRRHSTL  60
   61 VANRSDNNGN GAPMRQYNKP NFASSSTSSL PSTRNRPSRY DNMNMNMNMN MNMNMNMNMN 120
  121 MNNHTTSDHN AHPQYRCRPN PSRRHSLMTI PEKYSGSRYS LRSSPPTYSN PRVRKELTPF 180
  181 QLQRKQMKSA FQFPNGENFT PRNQIARLPP SSTFPDSPSS SSLPLTQTGG PSSADNDSIA 240
  241 TGTNNRSPQQ TKAADANQKS ESESPKAIRS NSKKISRFFR KIWSSKSSNS ADSVEENSKT 300
  301 KQKRKNPERV VPEPITSLDQ PVEIIKQSFS TVNNHETAVP SIKDSGIVQE LTALGDNNRI 360
  361 PVLPPPRSPN RPTLSDKRTT KLYYCSQDSS NEDIAPEEKS TVFLKRLQDE WSTVYLN

[Run NCBI BLAST on this sequence.]

Detection Method: ORFEUS
Confidence: 8.26
Match: 1i3qA
Description: RBP1
Matching Structure (courtesy of the PDB):

Predicted Domain #2
Region A:
Residues: [418-573]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 KLPLTASVPS SLSTTTDAAN SSFINSSISS PAPSSSSSSS LVSRGPMQSI SSSPTPAPSS  60
   61 GSSKSKNAVK SLRFADEIYV NDTWSAADYC RCDNTFLNNF FKGKSQDITN PSTFVGNNLS 120
  121 STKNISNIEI KMEVNEFKRK EMRVHQDSAK YTHYYL

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle