| Protein: | SCC4 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 624 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SCC4.
| Description | E-value | Query Range |
Subject Range |
|
|
414.0 | [0..9] | [616..4] |
|
|
323.0 | [0..13] | [621..30] |
|
|
305.0 | [0..13] | [619..48] |
|
Region A: Residues: [1-101] |
1 11 21 31 41 51
| | | | | |
1 MENLGDKLSI SQVYHLAQEY RDHAYSIANK IGSEEGLKQY YGLMNMSIQM FQLLKTKCTL 60
61 SVLEDSKVTF EMVELLIQET YNFDLAELYI SSLKERLQTH Q
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.950 | a.47.2 | t-snare proteins |
| View | Download | 0.917 | a.25.1 | Ferritin-like |
| View | Download | 0.907 | a.59.1 | PAH2 domain |
| View | Download | 0.799 | c.25.1 | Ferredoxin reductase-like, C-terminal NADP-linked domain |
| View | Download | 0.750 | a.185.1 | Gametocyte protein Pfg27 |
|
Region A: Residues: [102-272] |
1 11 21 31 41 51
| | | | | |
1 SDTDLVEEIM RCEFLLLHDL PLMRDSKFHY KIALRNCNEL VQYMVNLQDE LYQNWASVFQ 60
61 YVGVMLCIKL KQHRRVKTSF HGLLSQCREK SQWKWFLNLC YVNYLLNERF PIPEDALQEL 120
121 RSTELHTVGP ELYAWKLALE MVIQLCKDGN ITDHLNEFKN FFDTNKQSLV T
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [273-503] |
1 11 21 31 41 51
| | | | | |
1 NEGKGCVIKI MPRIALKVEL PMIFHYKELK NILLLLQSVS YIVNCYDEKG NFSRKFLPKV 60
61 YSTTQKLIKN IAAGGVSMNE LDSRIQTYKS ILEFCEFYKV WEQTLLKGAV VTTESPKLGP 120
121 SPGYVRLLQA MKVQFEGGGA VEEYTRLAQS GGTSSEVKMI SLLNCYTVQA ARVSRCSGDK 180
181 QGELVEQCNK VWLQVEKLLQ ETDLQFNPIW ECTVTILWLF SHFEPFSWNP L
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [504-624] |
1 11 21 31 41 51
| | | | | |
1 PCSDKQRAEY VSKLREFYSS NKFVAGEAVA DNRFKLKKAL LLQILVNYLG GRMLEHDLGE 60
61 IYAISAKCFD MCRQQGGMRK VQYVIGIWHL MNCTVAMRGK DVALTNAKLE ALVKQITSVK 120
121 Q
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.728 | a.80.1 | DNA polymerase III clamp loader subunits, C-terminal domain |
| View | Download | 0.696 | a.39.2 | Insect pheromon/odorant-binding proteins |
| View | Download | 0.676 | a.118.22 | Description not found. |
| View | Download | 0.676 | a.118.1 | ARM repeat |
| View | Download | 0.654 | a.74.1 | Cyclin-like |
| View | Download | 0.609 | a.182.1 | GatB/YqeY domain |
| View | Download | 0.601 | a.80.1 | DNA polymerase III clamp loader subunits, C-terminal domain |
