Protein: | KAP123 |
Organism: | Saccharomyces cerevisiae |
Length: | 1113 amino acids |
Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for KAP123.
Description | E-value | Query Range |
Subject Range |
|
0.0 | [1..1113] | [1..1113] |
|
0.0 | [3..1097] | [8..1099] |
|
0.0 | [7..1096] | [17..1103] |
|
0.0 | [1..1111] | [1..1102] |
|
0.0 | [2..1097] | [20..1116] |
|
0.0 | [1..1112] | [1..1066] |
|
0.0 | [1..1096] | [1..1090] |
Region A: Residues: [1-238] |
1 11 21 31 41 51 | | | | | | 1 MDQQFLSQLE QTLHAITSGV GLKEATKTLQ TQFYTQPTTL PALIHILQNG SDDSLKQLAG 60 61 VEARKLVSKH WNAIDESTRA SIKTSLLQTA FSEPKENVRH SNARVIASIG TEELDGNKWP 120 121 DLVPNLIQTA SGEDVQTRQT AIFILFSLLE DFTSSLSGHI DDFLALFSQT INDPSSLEIR 180 181 SLSAQALNHV SALIEEQETI NPVQAQKFAA SIPSVVNVLD AVIKADDTMN AKLIFNCL |
Detection Method: | |
Confidence: | 99.228787 |
Match: | 1qgkA_ |
Description: | Importin beta |
Matching Structure (courtesy of the PDB): |
Term | Confidence | Notes |
protein transporter activity | 4.58709163830613 | bayes_pls_golite062009 |
protein transmembrane transporter activity | 2.74547353635661 | bayes_pls_golite062009 |
binding | 2.61658111885029 | bayes_pls_golite062009 |
transporter activity | 2.48700774379895 | bayes_pls_golite062009 |
substrate-specific transporter activity | 2.26725422172281 | bayes_pls_golite062009 |
protein binding | 2.13529412360404 | bayes_pls_golite062009 |
nuclear localization sequence binding | 1.91487015967262 | bayes_pls_golite062009 |
nuclear export signal receptor activity | 1.29390474721722 | bayes_pls_golite062009 |
transmembrane transporter activity | 1.28481004323799 | bayes_pls_golite062009 |
RNA binding | 1.20550543134698 | bayes_pls_golite062009 |
substrate-specific transmembrane transporter activity | 1.09652988954158 | bayes_pls_golite062009 |
signal sequence binding | 0.57106697498903 | bayes_pls_golite062009 |
structural molecule activity | 0.449804281824548 | bayes_pls_golite062009 |
active transmembrane transporter activity | 0.252495966234234 | bayes_pls_golite062009 |
ion transmembrane transporter activity | 0.248585912061178 | bayes_pls_golite062009 |
primary active transmembrane transporter activity | 0.226380819487924 | bayes_pls_golite062009 |
P-P-bond-hydrolysis-driven transmembrane transporter activity | 0.217517113570989 | bayes_pls_golite062009 |
hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances | 0.178770060806735 | bayes_pls_golite062009 |
ATPase activity, coupled to movement of substances | 0.175241020572885 | bayes_pls_golite062009 |
ATPase activity, coupled to transmembrane movement of substances | 0.174922130116569 | bayes_pls_golite062009 |
nucleic acid binding | 0.169755106399802 | bayes_pls_golite062009 |
nucleoside-triphosphatase activity | 0.100181463251306 | bayes_pls_golite062009 |
pyrophosphatase activity | 0.0635404099346928 | bayes_pls_golite062009 |
hydrolase activity, acting on acid anhydrides | 0.0548082069333885 | bayes_pls_golite062009 |
hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides | 0.052195223119721 | bayes_pls_golite062009 |
cation transmembrane transporter activity | 0.0405268469927988 | bayes_pls_golite062009 |
Region A: Residues: [239-428] |
1 11 21 31 41 51 | | | | | | 1 NDFLLLDSQL TGNFIVDLIK LSLQIAVNSE IDEDVRVFAL QFIISSLSYR KSKVSQSKLG 60 61 PEITVAALKV ACEEIDVDDE LNNEDETGEN EENTPSSSAI RLLAFASSEL PPSQVASVIV 120 121 EHIPAMLQSA NVFERRAILL AISVAVTGSP DYILSQFDKI IPATINGLKD TEPIVKLAAL 180 181 KCIHQLTTDL |
Detection Method: | |
Confidence: | 99.228787 |
Match: | 1qgkA_ |
Description: | Importin beta |
Matching Structure (courtesy of the PDB): |
Region A: Residues: [429-523] |
1 11 21 31 41 51 | | | | | | 1 QDEVAKFHEE YLPLIIDIID SAKNIVIYNY ATVALDGLLE FIAYDAIAKY LDPLMNKLFY 60 61 MLESNESSKL RCAVVSAIGS AAFAAGSAFI PYFKT |
Detection Method: | |
Confidence: | 99.228787 |
Match: | 1qgkA_ |
Description: | Importin beta |
Matching Structure (courtesy of the PDB): |
Region A: Residues: [524-749] |
1 11 21 31 41 51 | | | | | | 1 SVHYLEKFIQ NCSQIEGMSE DDIELRANTF ENISTMARAV RSDAFAEFAE PLVNSAYEAI 60 61 KTDSARLRES GYAFIANLAK VYGENFAPFL KTILPEIFKT LELDEYQFNF DGDAEDLAAF 120 121 ADSANEEELQ NKFTVNTGIS YEKEVASAAL SELALGTKEH FLPYVEQSLK VLNEQVDESY 180 181 GLRETALNTI WNVVKSVLLA SKVEPESYPK GIPASSYVNA DVLAVI |
Detection Method: | |
Confidence: | 99.228787 |
Match: | 1qgkA_ |
Description: | Importin beta |
Matching Structure (courtesy of the PDB): |
Region A: Residues: [750-898] |
1 11 21 31 41 51 | | | | | | 1 QAARETSMGN LSDEFETSMV ITVMEDFANM IKQFGAIIIM DNGDSSMLEA LCMQVLSVLK 60 61 GTHTCQTIDI EEDVPRDEEL DASETEATLQ DVALEVLVSL SQALAGDFAK VFDNFRPVVF 120 121 GLFQSKSKNK RSSAVGAASE LALGMKEQN |
Detection Method: | |
Confidence: | 14.16 |
Match: | 1gw5B |
Description: | Adaptin beta subunit N-terminal fragment |
Matching Structure (courtesy of the PDB): |
Region A: Residues: [899-1113] |
1 11 21 31 41 51 | | | | | | 1 PFVHEMLEAL VIRLTSDKSL EVRGNAAYGV GLLCEYASMD ISAVYEPVLK ALYELLSAAD 60 61 QKALAAEDDE ATREIIDRAY ANASGCVARM ALKNSALVPL EQTVPALLAH LPLNTGFEEY 120 121 NPIFELIMKL YQENSPVITN ETPRIIEIFS AVFTKENDRI KLEKESTLGR EENMERLKQF 180 181 QTEEMKHKVI ELLKYLNTTY NGIVAQNPVL AAVIA |
Detection Method: | |
Confidence: | 14.16 |
Match: | 1gw5B |
Description: | Adaptin beta subunit N-terminal fragment |
Matching Structure (courtesy of the PDB): |