YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: YER076C
Organism: Saccharomyces cerevisiae
Length: 302 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for YER076C.

Description E-value Query
Range
Subject
Range
YER076C - Putative protein of unknown function; the authentic, non-tagged protein is detected in highly purifi...
gi|190405639 - gi|190405639|gb|EDV08906.1| conserved hypothetical protein [Saccharomyces cerevisiae RM11-1a]
YEQ6_YEAST - Putative uncharacterized protein YER076C OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN...
0.0 [1..302] [1..302]

Back

Predicted Domain #1
Region A:
Residues: [1-302]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTSGYYTVSF FYAILLLCAC TRAEIYLTGG ESQGLPSGFW QMDDDLAIAP VSMVEFYQTI  60
   61 GLTANGTVPE SFNKRDATEY PNIISNITTQ AANFTQHSLV EQLQNDVTAI SISNAINVAV 120
  121 DGSVETPADL QYNRNQETGE STLCRAKFYG VEVRTWSRLY NRAVSSTTLT TNLNSYIAQW 180
  181 VAWAVHGSGD KKFCGSQEFT NIFFDGQEGW SLFVKTWSTN SSCDITASEG NLTCAVRVSV 240
  241 SSMHNHGKTA FCVTYSHGDS WRAELRVVAN DAWSHYYPWS IDCPEVDKNN MAINDCFDQA 300
  301 QG

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle