| Protein: | ACA1 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 489 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ACA1.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..489] | [1..489] |
|
|
0.0 | [20..368] | [387..732] |
|
|
0.002 | [392..474] | [1..83] |
|
|
0.005 | [386..474] | [115..203] |
|
|
0.009 | [386..474] | [425..513] |
|
Region A: Residues: [1-121] |
1 11 21 31 41 51
| | | | | |
1 MDYKHNFATS PDSFLDGRQN PLLYTDFLSS NKELIYKQPS GPGLVDSAYN FHHQNSLHDR 60
61 SVQENLGPMF QPFGVDISHL PITNPPIFQS SLPAFDQPVY KRRISISNGQ ISQLGEDLET 120
121 V
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [122-384] |
1 11 21 31 41 51
| | | | | |
1 ENLYNCQPPI LSSKAQQNPN PQQVANPSAA IYPSFSSNEL QNVPQPHEQA TVIPEAAPQT 60
61 GSKNIYAAMT PYDSNIKLNI PAVAATCDIP SATPSIPSGD STMNQAYINM QLRLQAQMQT 120
121 KAWKNAQLNV HPCTPASNSS VSSSSSCQNI NDHNIENQSV HSSISHGVNH HTVNNSCQNA 180
181 ELNISSSLPY ESKCPDVNLT HANSKPQYKD ATSALKNNIN SEKDVHTAPF SSMHTTATFQ 240
241 IKQEARPQKI ENNTAGLKDG AKA
|
| Detection Method: | |
| Confidence: | 7.18 |
| Match: | 1i3qA |
| Description: | RBP1 |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [385-489] |
1 11 21 31 41 51
| | | | | |
1 WKRARLLERN RIAASKCRQR KKMSQLQLQR EFDQISKENT MMKKKIENYE KLVQKMKKIS 60
61 RLHMQECTIN GGNNSYQSLQ NKDSDVNGFL KMIEEMIRSS SLYDE
|
| Detection Method: | |
| Confidence: | 11.54 |
| Match: | 1fosH |
| Description: | C-jun |
Matching Structure (courtesy of the PDB): |
|
