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View Structure Prediction Details

Protein: PAC2
Organism: Saccharomyces cerevisiae
Length: 518 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PAC2.

Description E-value Query
Range
Subject
Range
gi|18542898 - gi|18542898|gb|AAL75740.1| Putative receptor-like protein kinase [Oryza sativa (japonica cultivar-gr...
gi|18542898, gi|... - gi|37531224|ref|NP_919914.1| putative receptor-like protein kinase [Oryza sativa (japonica cultivar-...
4.0E-85 [13..516] [108..639]
gi|9651945 - gi|9651945|gb|AAF91324.1|AF244890_1 receptor-like protein kinase 3 [Glycine max]
7.0E-85 [20..514] [46..526]
gi|12054894 - gi|12054894|emb|CAC20842.1| receptor protein kinase [Pinus sylvestris]
1.0E-84 [2..501] [165..668]
gi|3641252 - gi|3641252|gb|AAC36318.1| leucine-rich receptor-like protein kinase [Malus x domestica]
2.0E-84 [10..515] [33..528]
BAME2_ARATH - Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM2 OS=Arabidopsis thaliana GN=BA...
9.0E-84 [4..505] [27..522]

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Predicted Domain #1
Region A:
Residues: [1-71]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTYEIGDRLK IGGYFCTIKF IGVIKPWPSV KAYGVEWDDH SRGKHSGTID DIHYFDVQIP  60
   61 NSGSFLKESK I

[Run NCBI BLAST on this sequence.]

Detection Method: ORFEUS
Confidence: 14.5
Match: 1lplA
Description: Cytoskeleton-associated protein F53F4.3
Matching Structure (courtesy of the PDB):

Predicted Domain #2
Region A:
Residues: [72-162]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 KSPGVRRITF YEALSEKYGG SSNNINDLSI GNKRVEGLGF DELNARNKNY KKLRKIALRD  60
   61 SDVAILFQNQ DELNRVIQNC VNVKDLDLSL N

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 13.39794
Match: 2bnh__
Description: Ribonuclease inhibitor
Matching Structure (courtesy of the PDB):

Predicted Domain #3
Region A:
Residues: [163-214]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LFTNINSLCE FIEPLKNLES LNISQNKLLS GWDNLKEYDL SHIKTLRLSS CG

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 13.39794
Match: 2bnh__
Description: Ribonuclease inhibitor
Matching Structure (courtesy of the PDB):

Predicted Domain #4
Region A:
Residues: [215-265]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LSYKHIGKLL KSFRTLKMLD LSYNNLTSAG IQNFENEIPC TLEELNISGN N

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 13.39794
Match: 2bnh__
Description: Ribonuclease inhibitor
Matching Structure (courtesy of the PDB):

Predicted Domain #5
Region A:
Residues: [266-370]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LISFPLFPKN LTLKGLNVSN NQISRAPSIA IYSVESLDIT DNKFKERSLI DDLNKTFPSL  60
   61 KNIHLSGNEF NYNGNYINVE EQATFYEVLA RFDRVMVLNG SICDV

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 13.39794
Match: 2bnh__
Description: Ribonuclease inhibitor
Matching Structure (courtesy of the PDB):

Predicted Domain #6
Region A:
Residues: [371-518]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 KTRREAEMFF VSKVMNNELS YDTNLPRWSS LIKSYEIDMS KLSFNNERET RQSLVLKIKI  60
   61 RAGKKPSSDL DYWVLPSFTV RYVKSVICRK LNFDILNVKL FHENSEGMIN EIKYNFRPIS 120
  121 DFNVVNGDII HVSSPVNNKS IQKVNSPS

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 13.39794
Match: 2bnh__
Description: Ribonuclease inhibitor
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle