YRC Public Data Repository - Protein Structure Prediction

Protein:	GTT3
Organism:	Saccharomyces cerevisiae
Length:	337 amino acids
Reference:	Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076

[What does the above image mean?]

[Show Ginzu Version Information]

Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for GTT3.

Description	E-value	Query Range	Subject Range
GTT3 - Protein of unknown function with a possible role in glutathione metabolism, as suggested by computat... GTT3_YEAST - Glutathione transferase 3 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=GTT3 PE=1 SV=1 gi\|207346058 - gi\|207346058\|gb\|EDZ72670.1\| YEL017Wp-like protein [Saccharomyces cerevisiae AWRI1631]	0.0	[1..337]	[1..337]

Back

Predicted Domain #1

Region A:
Residues: [1-337]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPTKSTFSRW KKADLIDLAN KLEIDGFPNY AKKSDMIDYL ESHLNHLEKP VDFKDDYPEL  60
   61 RSFYESMTVD QSKDERNEYG SGSGNGSGSG SCDTATNDSD LEKAYIKEDD DEKPQSGDET 120
  121 SATKPLSSRN ANSNAKTNFN LLDFSTDNDS STSAFTKFKF NFQEYLSDIR YQTQKLNENV 180
  181 QDYLSTISAV DTIFSLLEFS FLVRNILAAG QPTSSSSLAS SLEAAVAAHN KYQYTLDFCL 240
  241 PILTWLLFFR GIPTLVSYYI NFIRYDLNIE LDPMTFNLTK FLISLAIFKT CNNKNIDFHS 300
  301 FRCVNQLWTQ LCTVNRSLGM VPLVFSMVSC LLTLYVL

[Run NCBI BLAST on this sequence.]

Detection Method:

deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2

Region A:
Residues: [148-337]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NDSSTSAFTK FKFNFQEYLS DIRYQTQKLN ENVQDYLSTI SAVDTIFSLL EFSFLVRNIL  60
   61 AAGQPTSSSS LASSLEAAVA AHNKYQYTLD FCLPILTWLL FFRGIPTLVS YYINFIRYDL 120
  121 NIELDPMTFN LTKFLISLAI FKTCNNKNID FHSFRCVNQL WTQLCTVNRS LGMVPLVFSM 180
  181 VSCLLTLYVL