| Protein: | HLR1 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 423 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for HLR1.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..423] | [1..423] |
|
Region A: Residues: [1-308] |
1 11 21 31 41 51
| | | | | |
1 MENLCPPPPS QMKDFSTPPR NRHRHKRSFA ISGDFEFLKQ PASAPVLPSA YDSPTFENTP 60
61 RRVSGMSVTM PDESQNESAL LNSPSPRFFI SEASTYSSPI KGVPDAIINL DDVLINKPKM 120
121 CRSHRKTKSV PVKLDEFYSS HKCSSVPELT INEEIDEDDT NPQLLEPVKP LSSTSLSTDM 180
181 NEDKKMTLKN ARSHNSLKIQ AQKQRYYNSA RYLPLNSEDR ATDPQILTKQ SSVTSLFSSR 240
241 SITPVSCNIN NAGRINAISG NYLDDVLYDL DTPATTLIQD IDNLQTSINE RVRLSPQSSS 300
301 IKKYFSKD
|
| Detection Method: |  |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [309-423] |
1 11 21 31 41 51
| | | | | |
1 GKSVSSFNFQ SQECDMVSFT EDFAHVTSLS SSILDSEKQT DDEEEESIPE EILRGEPLHV 60
61 YNETSGSDKS VILPTKQKSA PINKDSKHSS TQYEEKSFKK NRKFKIFAKL FCTRK
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.524 | a.11.2 | Second domain of FERM |
| View | Download | 0.368 | c.51.1 | Anticodon-binding domain of Class II aaRS |
| View | Download | 0.453 | a.24.4 | Hemerythrin |
| View | Download | 0.500 | a.29.5 | alpha-ketoacid dehydrogenase kinase, N-terminal domain |
| View | Download | 0.361 | d.129.2 | Phosphoglucomutase, C-terminal domain |
| View | Download | 0.331 | a.4.3 | ARID-like |
| View | Download | 0.310 | g.44.1 | RING/U-box |
| View | Download | 0.306 | f.36.1 | Neurotransmitter-gated ion-channel pransmembrane pore |
| View | Download | 0.299 | a.4.12 | TrpR-like |
| View | Download | 0.291 | a.24.11 | Bacterial GAP domain |
| View | Download | 0.288 | a.1.1 | Globin-like |
| View | Download | 0.278 | a.100.1 | 6-phosphogluconate dehydrogenase C-terminal domain-like |
| View | Download | 0.274 | a.26.1 | 4-helical cytokines |
| View | Download | 0.265 | a.26.1 | 4-helical cytokines |
| View | Download | 0.264 | a.24.13 | Domain of the SRP/SRP receptor G-proteins |
| View | Download | 0.256 | d.56.1 | GroEL-intermediate domain like |
| View | Download | 0.255 | d.129.1 | TATA-box binding protein-like |
| View | Download | 0.245 | a.74.1 | Cyclin-like |
| View | Download | 0.245 | a.1.1 | Globin-like |
| View | Download | 0.240 | d.221.1 | Nuclease A inhibitor (NuiA) |
| View | Download | 0.238 | a.25.2 | Thermoplasma ferritin-like 4-helical bundle |
| View | Download | 0.214 | c.17.1 | Caspase-like |
| View | Download | 0.214 | d.162.1 | LDH C-terminal domain-like |
|
Region A: Residues: [325-423] |
1 11 21 31 41 51
| | | | | |
1 VSFTEDFAHV TSLSSSILDS EKQTDDEEEE SIPEEILRGE PLHVYNETSG SDKSVILPTK 60
61 QKSAPINKDS KHSSTQYEEK SFKKNRKFKI FAKLFCTRK
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.524 | a.11.2 | Second domain of FERM |
| View | Download | 0.500 | a.29.5 | alpha-ketoacid dehydrogenase kinase, N-terminal domain |
| View | Download | 0.453 | a.24.4 | Hemerythrin |
| View | Download | 0.368 | c.51.1 | Anticodon-binding domain of Class II aaRS |
| View | Download | 0.361 | d.129.2 | Phosphoglucomutase, C-terminal domain |
