YRC Public Data Repository - Protein Structure Prediction

Protein:	MZM1
Organism:	Saccharomyces cerevisiae
Length:	123 amino acids
Reference:	Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for MZM1.

Description	E-value	Query Range	Subject Range
MZM1_NEUCR - Mitochondrial zinc maintenance protein 1, mitochondrial OS=Neurospora crassa (strain ATCC 24698 / 74... gi\|32419503, gi\|... - gi\|32419503\|ref\|XP_330195.1\| hypothetical protein ( (AL389890) conserved hypothetical protein [Neuro...	147.0	[0..7]	[100..3]
MZM1_CANGA - Mitochondrial zinc maintenance protein 1, mitochondrial OS=Candida glabrata (strain ATCC 2001 / CBS ... gi\|49525870 - gi\|49525870\|emb\|CAG59489.1\| unnamed protein product [Candida glabrata]	139.0	[0..4]	[120..7]
MZM1_KLULA - Mitochondrial zinc maintenance protein 1, mitochondrial OS=Kluyveromyces lactis (strain ATCC 8585 / ... gi\|49641885 - gi\|49641885\|emb\|CAH01603.1\| KLLA0C12419p [Kluyveromyces lactis]	111.0	[0..5]	[100..2]
gi\|44984885, gi\|... - gi\|45198856\|ref\|NP_985885.1\| AFR338Wp [Ashbya gossypii ATCC 10895], gi\|44984885\|gb\|AAS53709.1\| AFR33... MZM1_ASHGO - Mitochondrial zinc maintenance protein 1, mitochondrial OS=Ashbya gossypii (strain ATCC 10895 / CBS ...	107.0	[0..1]	[102..1]
gi\|46111805, gi\|... - gi\|46111805\|ref\|XP_382960.1\| hypothetical protein FG02784.1 [Gibberella zeae PH-1], gi\|42548000\|gb\|E...	94.0	[0..3]	[100..2]
gi\|39969915, gi\|... - gi\|86196069\|gb\|EAQ70707.1\| hypothetical protein MGCH7_ch7g114 [Magnaporthe grisea 70-15], gi\|3996991...	94.0	[0..5]	[112..2]
gi\|49655214 - gi\|49655214\|emb\|CAG87773.1\| DEHA2E05214p [Debaryomyces hansenii] MZM1_DEBHA - Mitochondrial zinc maintenance protein 1, mitochondrial OS=Debaryomyces hansenii (strain ATCC 36239 ...	85.0	[0..3]	[123..2]
MZM1_EMENI - Mitochondrial zinc maintenance protein 1, mitochondrial OS=Emericella nidulans GN=MZM1 PE=3 SV=1 MZM1_EMENI - Mitochondrial zinc maintenance protein 1, mitochondrial OS=Emericella nidulans (strain FGSC A4 / ATC...	84.0	[0..7]	[110..9]
MZM1_ASPOR - Mitochondrial zinc maintenance protein 1, mitochondrial OS=Aspergillus oryzae (strain ATCC 42149 / R... gi\|83774688 - gi\|83774688\|dbj\|BAE64811.1\| unnamed protein product [Aspergillus oryzae]	84.0	[0..7]	[108..8]
gi\|111063601 - gi\|111063601\|gb\|EAT84721.1\| hypothetical protein SNOG_08445 [Phaeosphaeria nodorum SN15]	83.0	[0..7]	[100..2]

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Predicted Domain #1

Region A:
Residues: [1-123]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSTRTKALNA YRHGLRATRI AFRNDAEVLL AARAKMRSGM LCPPDPKLTT EDQIQHLEDV  60
   61 AVFLRRNLVQ GKKVDGSSTK EPRYHLNIHK DTELGDNETI ADPTARVKTN LKARPFKCSD 120
  121 KKQ

[Run NCBI BLAST on this sequence.]

Detection Method:

deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits