Protein: | SPP41 |
Organism: | Saccharomyces cerevisiae |
Length: | 1435 amino acids |
Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SPP41.
Description | E-value | Query Range |
Subject Range |
|
0.0 | [1..1435] | [1..1435] |
|
6.0E-62 | [4..1173] | [30..1213] |
|
6.0E-60 | [2..1218] | [431..1674] |
|
6.0E-58 | [20..1302] | [1129..2410] |
Region A: Residues: [1-619] |
1 11 21 31 41 51 | | | | | | 1 MAYDEDDGEI NFNELVGNLL SSHNQEGQEE GEVQGGEQEG DDFEKIYPTS ENIEPKHPDD 60 61 SQHMHNSPDQ NIEIPHFVDE EDELVSVVAN AVQNIDDEQA KPENHLENGS EHVTSDTADD 120 121 NHEKEQQQEW AHILQQEILK SDGEPLRENT ERRVSTSQHH PSQRTDDALD QDDENLRMAI 180 181 LESLQELNTN EEEEKEPEKH EHAAPNDKLS SKKSSKKKKK DKSKNRESSK DKSSKKSKSS 240 241 SHSKKHAKDR NKEKQSKPTN NENTLDLSNI LENLIHENDN AAIDTAKQTV DIQDNSHTDN 300 301 TNNEDVEAQA LVEATLKAFE NELLSSAPTE EPSQEQSIGP VSSRKAVEPP RKPTADDIPL 360 361 AMLQAFKPKK RPPQEKKKTK SKTSKAASTA NKSPASESTS KKKKKKKTVK ESNKSQEAYE 420 421 DDEFSRILAD MVNQVVNTSL KETSTHTATQ DNKLESESDF TSPVQSQYTT EDASTANDDS 480 481 LDLNQIMQNA MAMVFQNQND DEFDENIVED FNRGLGDLSV SDLLPHDNLS RMEKKSVPKS 540 541 SSKSEKKTAI SRRASKKASR DASSVELTEV PSKPKKPSKT EVSLEKKLRK KYVSIANEAA 600 601 SVARKKRWAK NKELKEKEK |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
Region A: Residues: [620-1210] |
1 11 21 31 41 51 | | | | | | 1 LERQTAREER RHKKKLEKQR LAEEQEELKK IVERGPPYPP DLRLTKSGKP KKPYRRWTPE 60 61 ELLKRSQEAE KPRKVKKERK KKEKKMKVPS SALKKIPLFN FVKGNVQPSA RHRLNDIEGS 120 121 LSTIGLHKSP DGVRRILSRP KSEDHEWPLS DSSASQNYDA HLKTVVHKEK IPFHPPWTIP 180 181 SQPPFALPVA RRKKIPNIKK YRKRTNNSFR VSKEGTASTR NRILPAILLP IINTLKAAAK 240 241 SQTAAGATPE EARKRLATII QHAKSTVIRA ALQARKNSMQ AAHSKGTTTE LATTASRMKN 300 301 PLKMIPIFNT SRVKQQLDKQ LPARSAGTEI SSSESPDKAT PDPHSNSTIA GHTLKGVTTP 360 361 IKIEDSDANV PPVSIAVSTI EPSQDKLELT KRAESVEPVE NNVETAKETQ SVQEIKENVG 420 421 TKASEEVTLT EDKTNGDPKN EKRILIESPV EKTDKKKPGE KIATDLNEDA SLSDKKDGDE 480 481 KSTLHSDAAQ LTGNEPDSVN TTTGKPKLID VSLKPLNEAK PKIPIIFPLK RPQIKPEVSV 540 541 INLVQNLVNT KIPEIKNESV DLGSNITDIL SSTITNILPE ITATDVKNYQ Y |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
Region A: Residues: [1211-1262] |
1 11 21 31 41 51 | | | | | | 1 EDENVKYLKK TPRQVLNLDG LVPPSGRCIT KAKRVRRIKK LSADATTAPE AD |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
View | Download | 0.330 | 0.907 | negative regulation of transcription from RNA polymerase II promoter | a.22.1 | Histone-fold |
Region A: Residues: [1263-1435] |
1 11 21 31 41 51 | | | | | | 1 GKANSESITY TFDIPSPEEV QSKRSVVLKF AKARLTEAEL SCLKKEINNV RKRRWREMNS 60 61 TKNWEYDVKS RLKKRANAFF GEGESETKSK WIEERFQEKV SQEKYKDRLE TTETQANNTK 120 121 IVIDDKEILN ILAVNMNNLN KARCIEKDIQ ESFREEKLAS LQPKKKRKKS ILH |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
Region A: Residues: [580-664] |
1 11 21 31 41 51 | | | | | | 1 TEVSLEKKLR KKYVSIANEA ASVARKKRWA KNKELKEKEK LERQTAREER RHKKKLEKQR 60 61 LAEEQEELKK IVERGPPYPP DLRLT |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
Region A: Residues: [665-875] |
1 11 21 31 41 51 | | | | | | 1 KSGKPKKPYR RWTPEELLKR SQEAEKPRKV KKERKKKEKK MKVPSSALKK IPLFNFVKGN 60 61 VQPSARHRLN DIEGSLSTIG LHKSPDGVRR ILSRPKSEDH EWPLSDSSAS QNYDAHLKTV 120 121 VHKEKIPFHP PWTIPSQPPF ALPVARRKKI PNIKKYRKRT NNSFRVSKEG TASTRNRILP 180 181 AILLPIINTL KAAAKSQTAA GATPEEARKR L |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
Region A: Residues: [876-983] |
1 11 21 31 41 51 | | | | | | 1 ATIIQHAKST VIRAALQARK NSMQAAHSKG TTTELATTAS RMKNPLKMIP IFNTSRVKQQ 60 61 LDKQLPARSA GTEISSSESP DKATPDPHSN STIAGHTLKG VTTPIKIE |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
Region A: Residues: [984-1201] |
1 11 21 31 41 51 | | | | | | 1 DSDANVPPVS IAVSTIEPSQ DKLELTKRAE SVEPVENNVE TAKETQSVQE IKENVGTKAS 60 61 EEVTLTEDKT NGDPKNEKRI LIESPVEKTD KKKPGEKIAT DLNEDASLSD KKDGDEKSTL 120 121 HSDAAQLTGN EPDSVNTTTG KPKLIDVSLK PLNEAKPKIP IIFPLKRPQI KPEVSVINLV 180 181 QNLVNTKIPE IKNESVDLGS NITDILSSTI TNILPEIT |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
Region A: Residues: [1202-1435] |
1 11 21 31 41 51 | | | | | | 1 ATDVKNYQYE DENVKYLKKT PRQVLNLDGL VPPSGRCITK AKRVRRIKKL SADATTAPEA 60 61 DGKANSESIT YTFDIPSPEE VQSKRSVVLK FAKARLTEAE LSCLKKEINN VRKRRWREMN 120 121 STKNWEYDVK SRLKKRANAF FGEGESETKS KWIEERFQEK VSQEKYKDRL ETTETQANNT 180 181 KIVIDDKEIL NILAVNMNNL NKARCIEKDI QESFREEKLA SLQPKKKRKK SILH |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.