YRC Public Data Repository - Protein Structure Prediction

Protein:	BNA7
Organism:	Saccharomyces cerevisiae
Length:	261 amino acids
Reference:	Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for BNA7.

Description	E-value	Query Range	Subject Range
gi\|5509944 - gi\|5509944\|dbj\|BAA82510.1\| esterase HDE [petroleum-degrading bacterium HD-1]	1.0E-58	[7..254]	[56..298]
gi\|25517648, gi\|... - pir\|\|AI1335 lipases homolog lmo2089 [imported] - Listeria monocytogenes (strain EGD-e), gi\|16411559... gi\|224501113 - gi\|224501113\|ref\|ZP_03669420.1\| hypothetical protein LmonFR_01090 [Listeria monocytogenes FSL R2-561... gi\|16804128 - gi\|16804128\|ref\|NP_465613.1\| hypothetical protein lmo2089 [Listeria monocytogenes EGD-e] gi\|133729270, gi... - gi\|254827023\|ref\|ZP_05231710.1\| hypothetical protein LmonocytogeFSL_01085 [Listeria monocytogenes FS...	6.0E-58	[6..260]	[90..340]
gi\|25516971, gi\|... - pir\|\|AG1706 lipases homolog lin2194 [imported] - Listeria innocua (strain Clip11262), gi\|16414707\|e... gi\|16801259 - gi\|16801259\|ref\|NP_471527.1\| hypothetical protein lin2194 [Listeria innocua Clip11262]	3.0E-57	[6..260]	[90..340]
gi\|11513478 - gi\|11513478\|pdb\|1EVQ\|A Chain A, The Crystal Structure Of The Thermophilic Carboxylesterase Est2 From... gi\|11513478\|pdb\|... - Chain A, The Crystal Structure Of The Thermophilic Carboxylesterase Est2 From Alicyclobacillus Acido...	1.0E-55	[10..260]	[56..299]
gi\|17943080, gi\|... - pir\|\|C69464 carboxylesterase (estA) homolog - Archaeoglobus fulgidus, gi\|17943080\|pdb\|1JJI\|D Chain ... gi\|11499305, gi\|... - gi\|2648837\|gb\|AAB89533.1\| carboxylesterase (estA) [Archaeoglobus fulgidus DSM 4304], gi\|11499305\|ref...	2.0E-55	[6..260]	[60..301]
gi\|241770096, gi... - gi\|241770096\|ref\|ZP_04767509.1\| Alpha/beta hydrolase fold-3 domain protein [Sulfolobus solfataricus ... gi\|15899257, gi\|... - gi\|15899257\|ref\|NP_343862.1\| lipase (lipP-2) [Sulfolobus solfataricus P2], gi\|13815823\|gb\|AAK42652.1... gi\|25392653 - pir\|\|E90424 lipase (lipP-2) [imported] - Sulfolobus solfataricus	3.0E-55	[1..249]	[53..286]
gi\|18495821 - gi\|18495821\|emb\|CAD10803.1\| putative steroid monooxygenase / esterase fusion protein [Rhodococcus rh...	3.0E-55	[16..255]	[599..827]
gi\|15621032, gi\|... - gi\|15920250\|ref\|NP_375919.1\| esterase [Sulfolobus tokodaii str. 7], gi\|15621032\|dbj\|BAB65028.1\| 303a...	1.0E-53	[5..253]	[48..283]
gi\|2853612 - gi\|2853612\|gb\|AAC38151.1\| lipase [Pseudomonas sp. B11-1]	2.0E-52	[12..254]	[59..291]

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Predicted Domain #1

Region A:
Residues: [1-261]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSNTVRAISP DITLFNKTLT FQEISQNTRE AVIYIHGGAW NDPENTPNDF NQLANTIKSM  60
   61 DTESTVCQYS IEYRLSPEIT NPRNLYDAVS NITRLVKEKG LTNINMVGHS VGATFIWQIL 120
  121 AALKDPQEKM SEAQLQMLGL LQIVKRVFLL DGIYSLKELL VEYPEYDCFT RLAFPDGIQM 180
  181 YEEEPSRVMP YVKKALSRFS IDMHLVHSYS DELLTLRQTN CLISCLQDYQ LSFKLYLDDL 240
  241 GLHNDVYKNG KVAKYIFDNI C

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	56.522879
Match:	1evqA_
Description:	Carboxylesterase
Matching Structure (courtesy of the PDB):

Predicted functions:

Term	Confidence	Notes
catalytic activity	1.39629727416851	bayes_pls_golite062009
hydrolase activity, acting on ester bonds	0.0826826466384701	bayes_pls_golite062009

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits

Predicted functions: