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View Structure Prediction Details

Protein: YDR413C
Organism: Saccharomyces cerevisiae
Length: 191 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

No multiple sequence alignment data found for YDR413C.

Predicted Domain #1
Region A:
Residues: [1-116]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRLHYLLRLL SFAFLWFILR SFLVKYLNFF TLGFFFCFSS TPRNFAYLVA LFMLCLSTFS  60
   61 AFSNLTLFSW AKYSKLSLGS NVSNSTVVES SYISVIAPFF KIGFTLLSLL SLSPSS

[Run NCBI BLAST on this sequence.]

Detection Method: ab initio
Confidence: 5.86
Match:
Description: No description for 1brrA was found.

Predicted Domain #2
Region A:
Residues: [117-191]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LSESNPCQDS SDSTCKSSVL SFFASSISAS KFKLSLNVFN CSSITSLRSC RIFCLSSIFL  60
   61 SLSCSLINSC AFFCL

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

    MCM
Score
SCOP
Match
SCOP Description
View Download 0.685 a.8.4 Description not found.
View Download 0.650 a.239.1 Description not found.
View Download 0.645 d.68.1 Translation initiation factor IF3, C-terminal domain
View Download 0.635 a.8.11 Description not found.
View Download 0.628 a.4.9 Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3
View Download 0.472 a.80.1 DNA polymerase III clamp loader subunits, C-terminal domain
View Download 0.465 a.16.1 S15/NS1 RNA-binding domain


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle