Protein: | VPS74 |
Organism: | Saccharomyces cerevisiae |
Length: | 345 amino acids |
Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for VPS74.
Description | E-value | Query Range |
Subject Range |
|
473.0 | [0..4] | [345..5] |
|
461.0 | [0..3] | [345..2] |
|
438.0 | [0..1] | [345..1] |
|
428.0 | [0..4] | [297..5] |
|
423.0 | [0..9] | [340..1] |
|
423.0 | [0..1] | [340..1] |
|
413.0 | [0..3] | [345..2] |
|
413.0 | [0..1] | [340..1] |
|
413.0 | [0..1] | [340..1] |
|
396.0 | [0..20] | [340..5] |
Region A: Residues: [1-64] |
1 11 21 31 41 51 | | | | | | 1 MSTLQRRRVN RADSGDTSSI HSSANNTKGD KIANIAVDGD DDNGTNKKIA YDPEESKLRD 60 61 NINI |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
MCM Score |
SCOP Match |
SCOP Description | ||
View | Download | 0.560 | d.58.18 | Regulatory domain in the aminoacid metabolism |
View | Download | 0.549 | g.18.1 | Complement control module/SCR domain |
View | Download | 0.540 | d.58.18 | Regulatory domain in the aminoacid metabolism |
View | Download | 0.537 | g.18.1 | Complement control module/SCR domain |
View | Download | 0.526 | g.81.1 | Description not found. |
View | Download | 0.442 | g.18.1 | Complement control module/SCR domain |
View | Download | 0.436 | g.18.1 | Complement control module/SCR domain |
View | Download | 0.406 | d.58.44 | Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains |
Region A: Residues: [65-345] |
1 11 21 31 41 51 | | | | | | 1 PTLTLMEEVL LMGLRDREGY LSFWNDSISY ALRGCIIIEL ALRGKIRILD DSARKRFDLS 60 61 ERLIEVIDSS KTGEVLLDET LQLMKNDEPL SISNWIDLLS GETWNLLKIN YQLKQVRERL 120 121 AKGLVDKGVL RTEMKNFFLF DMATHPIADA SCKEAIKRRV LSVLVSRNME LSYNEYFPET 180 181 TSFKIIRTLA LICGSYGANV LENVLTTLEY EKRDKAISRA EEIMAQFSQY PFDLEKETEL 240 241 GVSVNLNKEV KEEIENNPGH DLQLEVIAGV FEVFSRMDML L |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.