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View Structure Prediction Details

Protein: YDR370C
Organism: Saccharomyces cerevisiae
Length: 442 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for YDR370C.

Description E-value Query
Range
Subject
Range
gi|190404695 - gi|190404695|gb|EDV07962.1| conserved hypothetical protein [Saccharomyces cerevisiae RM11-1a]
DXO1_YEAST - Decapping and exoribonuclease protein 1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=...
YDR370C - Putative protein of unknown function
gi|207346383 - gi|207346383|gb|EDZ72894.1| YDR370Cp-like protein [Saccharomyces cerevisiae AWRI1631]
0.0 [1..442] [1..442]

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Predicted Domain #1
Region A:
Residues: [1-442]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSTEQDAVLG LAKDLEGINL LTVPNLERGH QSKLCKEKTT SDSSSSRKPS QQRDNYRKRR  60
   61 PKLICIPYTS FLHTGMHNFL TKPPRDIFHE SKEVALFTNG RAYTILRKDL IPNLKESIAE 120
  121 LYESSLLEAK KRKVPYLGHD LFANIDEFVP MTISELDSVS PCFSYIENWI LDNPGKDFKI 180
  181 GKKFTVVTTR HHIVDLTMHL FNRRNRQTSL IVTYMGAGLL SFCRNVKKDS QMSKEGIYSN 240
  241 DPNMKKICYS GFEFENWVTE NSKVADLTGS KCPIFSLVES KLSEEIGLLI RCEMDAFNPV 300
  301 SETNTELKCF APLSMHNSNH RRKLLKTWVQ TGLLPNSDIM IGLRDSHSGQ LLDIQWYSRD 360
  361 LLCKKFNHPG LPTNKKELNY NAQIAVEWCH YCIEAICKLV EANISDYSST KPESFEIGID 420
  421 TNNAIVITKL KTTPRNVELF GM

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [135-232]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PYLGHDLFAN IDEFVPMTIS ELDSVSPCFS YIENWILDNP GKDFKIGKKF TVVTTRHHIV  60
   61 DLTMHLFNRR NRQTSLIVTY MGAGLLSFCR NVKKDSQM

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [233-442]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SKEGIYSNDP NMKKICYSGF EFENWVTENS KVADLTGSKC PIFSLVESKL SEEIGLLIRC  60
   61 EMDAFNPVSE TNTELKCFAP LSMHNSNHRR KLLKTWVQTG LLPNSDIMIG LRDSHSGQLL 120
  121 DIQWYSRDLL CKKFNHPGLP TNKKELNYNA QIAVEWCHYC IEAICKLVEA NISDYSSTKP 180
  181 ESFEIGIDTN NAIVITKLKT TPRNVELFGM 

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle