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View Structure Prediction Details

Protein: YDR338C
Organism: Saccharomyces cerevisiae
Length: 695 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for YDR338C.

Description E-value Query
Range
Subject
Range
YD338_YEAST - Uncharacterized transporter YDR338C OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YDR3...
YDR338C - Putative protein of unknown function
0.0 [1..695] [1..695]
gi|447739 - gi|447739|prf||1915304A nylB upstream ORF
2.0E-96 [123..672] [65..616]
DTX39_ARATH - Protein DETOXIFICATION 39 OS=Arabidopsis thaliana GN=DTX39 PE=2 SV=1
1.0E-93 [171..676] [16..504]
SPCC4B3.13 - MatE family transporter
YJ2D_SCHPO - Uncharacterized transporter C4B3.13 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC4B...
1.0E-90 [132..670] [1..539]
gi|16797803 - gi|16797803|dbj|BAB71817.1| hypothetical membrane protein-1 [Marchantia polymorpha]
6.0E-90 [186..682] [6..507]

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Predicted Domain #1
Region A:
Residues: [1-200]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAGILSKTLS EVHPSLRTNG MGIGNTHRRI SLGFLPPNKK NPLVRKFRAR TRNIDQRSFR  60
   61 SLTDDFGSNV HEPNPYLGNI DEEPDLYYHD EEDGELSRTI SLPSRVSETP ELSPQDVDWI 120
  121 LHEHERRYSS VCNSDNEEAS QSNTPDRIQE YSGRELEYDE FMNRLQAQKQ KLTRSAVTDA 180
  181 KGTSHHRRPS FVSVTSRGSV 

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [201-343]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PTIYQEIDEN DSEALAELAH SHVTFKSEAR VLASYSFPLI FTFLLEQIFP MVCSLTVGHL  60
   61 GKNELAAVSL ASMTSNITLA IFEGIATSLD TLCPQAYGSG RFYSVGVHLQ RCIAFSLVIY 120
  121 IPFAVMWWYS EPLLSYIIPE KEL

[Run NCBI BLAST on this sequence.]

Detection Method: ORFEUS
Confidence: 7.25
Match: 1b3uA
Description: Constant regulatory domain of protein phosphatase 2a, pr65alpha
Matching Structure (courtesy of the PDB):

Predicted Domain #3
Region A:
Residues: [344-512]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 INLTSRFLRV LILGAPAYIF FENLKRFLQA QGIFDAGIYV LTICAPLNVL VSYTLVWNKY  60
   61 IGVGFIGAAI AVVLNFWLMF FLLLFYALYI DGRKCWGGFS RKAFTHWNDL GHLAFSGIIM 120
  121 LEAEELSYEL LTLFSAYYGV SYLAAQSAVS TMAALLYMIP FAIGISTST

[Run NCBI BLAST on this sequence.]

Detection Method: ORFEUS
Confidence: 7.25
Match: 1b3uA
Description: Constant regulatory domain of protein phosphatase 2a, pr65alpha
Matching Structure (courtesy of the PDB):

Predicted Domain #4
Region A:
Residues: [513-695]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 RIANFIGAKR TDFAHISSQV GLSFSFIAGF INCCILVFGR NLIANIYSKD PEVIKLIAQV  60
   61 LPLVGIVQNF DSLNAVAGSC LRGQGMQSLG SIVNLMAYYL FGIPLALILS WFFDMKLYGL 120
  121 WIGIGSAMLL IGLVEAYYVL FPDWDKIMTY AEILKETEDD EVDSDEYLTD SDDPDENTAL 180
  181 LGA

[Run NCBI BLAST on this sequence.]

Detection Method: ORFEUS
Confidence: 7.25
Match: 1b3uA
Description: Constant regulatory domain of protein phosphatase 2a, pr65alpha
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle