| Protein: | SUM1 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 1062 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SUM1.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [21..1062] | [8..1048] |
|
|
0.001 | [190..406] | [1354..1570] |
|
|
0.002 | [203..384] | [206..394] |
|
Region A: Residues: [1-189] |
1 11 21 31 41 51
| | | | | |
1 MSENTTAPSD NITNEQRLPS GPKDDVDTLA LTSAQNQANS LRKLDTDANA KALPSITDIP 60
61 VSDDSDIKRQ VGSGFGSNPL HIKDSEAFPH SSIEALKEGM DKVTKQCNDL KTALLSKDTS 120
121 LTDSVQDLFN SLKVLSHNQS VLENKLDDVM KNQVNTDILV NNLNERLNKL STMLQNTSKV 180
181 NHSNLLIEN
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [190-411] |
1 11 21 31 41 51
| | | | | |
1 SSNNTSSQHN TSSSRRGPGR PRKDASTSTM NKLVSNAASV NLKSASNQGA PFSPVNITLP 60
61 TAVVQTSKSK RYFVEPSTKQ ESLLLSAPSS SRDDADMSLT SVPQRTNNEN GKERPSTANS 120
121 SSITPTPVTP NNLIQIKRKR GRPPKKRTVE TMISNSTDTI DKSDASNRIK NEIPINSLLP 180
181 SSKFHQIPSS PSNPVSQPAP VRTSRSATQE IDIKSLELAS LI
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [412-1062] |
1 11 21 31 41 51
| | | | | |
1 STNGDPNAED SNTTDTVHNN VEGKVNVEEN KTEKEKIITI KSSSENSGNN TTNNNNTDNV 60
61 IKFSANSDIN SDIRRLMVND QFSLSYDASG NITVKLPPVS SPAAATAAAA AAVTSEMNRQ 120
121 QRELDKRRDS REKMLVNMKY NDRDKAKSFM ESNKKLLKAM KEEERRKRMT SIIHDNHLNL 180
181 NLNEISTRSK IKSAEKPTTK GSSMSPKPRS ASISGISDHQ QEGYQPLEQE KLVDIDNEGS 240
241 NANSDSLKMG LTISAADTVH KVGIQSMLNS GEEAITKENA EYERKTPGDE ETTTFVPLEN 300
301 SQPSDTIRKR TAGDDGALDQ TENTSISPKK RRTEDHTKGE EDEGERGVGN SGTLATVENV 360
361 SGDISADLSK GTSSIHNDTE SANDSSNGNG NLGLGTESRN TLLTATPIEL ICREGFFYRR 420
421 DIPDVPITTG AYLEFKFKAK EEELINSSIN EEDYAAKSKH EKMNAHFFKP DIQEETELAF 480
481 EILSKTTLTE KYVNSLEYFL MEFRWENKLV GLGLKLRESK RTWQRRKALF ALFEFWRDQS 540
541 RDKRRFHNYT ILHAVKEMEN YRIFINRSVS WFYNHITLLK MILYDLCDNV TTQWREWMFP 600
601 HNETLPALGQ DGINEDNLNE TIDNMLIFDF LDDGSENNQV KYSRIIPPDI R
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
