Protein: | SUM1 |
Organism: | Saccharomyces cerevisiae |
Length: | 1062 amino acids |
Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SUM1.
Description | E-value | Query Range |
Subject Range |
|
0.0 | [21..1062] | [8..1048] |
|
0.001 | [190..406] | [1354..1570] |
|
0.002 | [203..384] | [206..394] |
Region A: Residues: [1-189] |
1 11 21 31 41 51 | | | | | | 1 MSENTTAPSD NITNEQRLPS GPKDDVDTLA LTSAQNQANS LRKLDTDANA KALPSITDIP 60 61 VSDDSDIKRQ VGSGFGSNPL HIKDSEAFPH SSIEALKEGM DKVTKQCNDL KTALLSKDTS 120 121 LTDSVQDLFN SLKVLSHNQS VLENKLDDVM KNQVNTDILV NNLNERLNKL STMLQNTSKV 180 181 NHSNLLIEN |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
Region A: Residues: [190-411] |
1 11 21 31 41 51 | | | | | | 1 SSNNTSSQHN TSSSRRGPGR PRKDASTSTM NKLVSNAASV NLKSASNQGA PFSPVNITLP 60 61 TAVVQTSKSK RYFVEPSTKQ ESLLLSAPSS SRDDADMSLT SVPQRTNNEN GKERPSTANS 120 121 SSITPTPVTP NNLIQIKRKR GRPPKKRTVE TMISNSTDTI DKSDASNRIK NEIPINSLLP 180 181 SSKFHQIPSS PSNPVSQPAP VRTSRSATQE IDIKSLELAS LI |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
Region A: Residues: [412-1062] |
1 11 21 31 41 51 | | | | | | 1 STNGDPNAED SNTTDTVHNN VEGKVNVEEN KTEKEKIITI KSSSENSGNN TTNNNNTDNV 60 61 IKFSANSDIN SDIRRLMVND QFSLSYDASG NITVKLPPVS SPAAATAAAA AAVTSEMNRQ 120 121 QRELDKRRDS REKMLVNMKY NDRDKAKSFM ESNKKLLKAM KEEERRKRMT SIIHDNHLNL 180 181 NLNEISTRSK IKSAEKPTTK GSSMSPKPRS ASISGISDHQ QEGYQPLEQE KLVDIDNEGS 240 241 NANSDSLKMG LTISAADTVH KVGIQSMLNS GEEAITKENA EYERKTPGDE ETTTFVPLEN 300 301 SQPSDTIRKR TAGDDGALDQ TENTSISPKK RRTEDHTKGE EDEGERGVGN SGTLATVENV 360 361 SGDISADLSK GTSSIHNDTE SANDSSNGNG NLGLGTESRN TLLTATPIEL ICREGFFYRR 420 421 DIPDVPITTG AYLEFKFKAK EEELINSSIN EEDYAAKSKH EKMNAHFFKP DIQEETELAF 480 481 EILSKTTLTE KYVNSLEYFL MEFRWENKLV GLGLKLRESK RTWQRRKALF ALFEFWRDQS 540 541 RDKRRFHNYT ILHAVKEMEN YRIFINRSVS WFYNHITLLK MILYDLCDNV TTQWREWMFP 600 601 HNETLPALGQ DGINEDNLNE TIDNMLIFDF LDDGSENNQV KYSRIIPPDI R |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.