| Protein: | RSC3 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 885 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for RSC3.
| Description | E-value | Query Range |
Subject Range |
|
|
967.0 | [0..1] | [882..2] |
|
|
338.0 | [0..2] | [882..4] |
|
|
319.0 | [0..1] | [885..1] |
|
|
149.0 | [0..7] | [230..17] |
|
|
142.0 | [0..5] | [218..20] |
|
|
142.0 | [0..6] | [225..21] |
|
Region A: Residues: [1-171] |
1 11 21 31 41 51
| | | | | |
1 MDIRGRKMKK PPACVQCRKR KIGCDRVKPI CGNCMKHNKM DCFYPDVPGQ YVPSSSSSSN 60
61 TRQVANGPYL NSYYASRRVS KETAALLQKN PELASLEQIR EYNTRLQLLN AQNQLNNRSS 120
121 AANATLNQQH TQYIPKSVPS LESKPVTSAN ESSTPLNWVQ GPAIFHMLTS P
|
| Detection Method: |  |
| Confidence: | 13.30103 |
| Match: | 1pyiA |
| Description: | PPR1 |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [172-241] |
1 11 21 31 41 51
| | | | | |
1 YTQDEIINHE MNFLKGRLLE LQEITGKKIT GVNLDLKQDS SAQMQSSHSN RNQEEFLTIK 60
61 KRKLSEDGVT
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [242-399] |
1 11 21 31 41 51
| | | | | |
1 DGDGKPIPES ERRPHLNEFK DLDPQFLDTN KVFNVFNSAI SEEGRNRLWL LPKNINKSSI 60
61 FQIQYLIERD PFLFKFFNDL NILIETQFNG PLHDLVASRN SIERNSGISQ ILKFPSQSIT 120
121 QTLINKYLST ITETNSILPI LKPKRLLPIV EQLFPSNT
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [400-562] |
1 11 21 31 41 51
| | | | | |
1 INKPNSKDFE TIFQVFSVTN DQLLNLGFIT LCLLILFESL NSTVLIPLRD DEHLQLFNVL 60
61 FNYLPLLKSN LTTLRFEIEK RSMCNIETLR FISLWKYYQF VMDTSSSSSF VIDYDEDMHM 120
121 ACLLSLNHET QNQSHILTWN FIFKNYCWRH LFLGQLPLLM SEP
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [563-801] |
1 11 21 31 41 51
| | | | | |
1 FTNSTPIIDP LLNNDFELID FEVNLMKYLQ SKDQQLSIDK IIQLIKLLKN KNIEVSQGCL 60
61 TTPSIINNIM DSLIYRNSML YLNFYLLLQF ETLKNYAKFN EILEDFLELS RETLFFVFSN 120
121 LANIKFAGHE FTFINKSIVV LQTLVLMLLA LYQRSFDSSK RTNDANEISE QTDIHSNNDN 180
181 SKRIKNKNVI HLIINKIAML LSDYTKNCKK QNKLIENLII KIKTISKYIK NLEENKVTT
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [802-885] |
1 11 21 31 41 51
| | | | | |
1 SADSNYSINN GFSGISAEQL IKLNHELSKI SESLIKTDFY EQRKNSTVSN GVLGAAAPVD 60
61 SDANSDTFGL TKENFNEVFE AIRS
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.834 | a.74.1 | Cyclin-like |
| View | Download | 0.832 | a.74.1 | Cyclin-like |
| View | Download | 0.674 | a.74.1 | Cyclin-like |
| View | Download | 0.661 | a.74.1 | Cyclin-like |
| View | Download | 0.661 | a.74.1 | Cyclin-like |
| View | Download | 0.642 | a.74.1 | Cyclin-like |
| View | Download | 0.561 | a.74.1 | Cyclin-like |
| View | Download | 0.552 | a.74.1 | Cyclin-like |
| View | Download | 0.487 | a.74.1 | Cyclin-like |
| View | Download | 0.481 | a.74.1 | Cyclin-like |
