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View Structure Prediction Details

Protein: GPI11
Organism: Saccharomyces cerevisiae
Length: 219 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for GPI11.

Description E-value Query
Range
Subject
Range
GPI11 - ER membrane protein involved in a late step of glycosylphosphatidylinositol (GPI) anchor assembly; i...
GPI11_YEAST - Glycosylphosphatidylinositol anchor biosynthesis protein 11 OS=Saccharomyces cerevisiae (strain ATCC...
gi|151942274 - gi|151942274|gb|EDN60630.1| glycosylphosphatidylinositol anchor biosynthesis [Saccharomyces cerevisi...
gi|207346485 - gi|207346485|gb|EDZ72968.1| YDR302Wp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|190404755 - gi|190404755|gb|EDV08022.1| glycosylphosphatidylinositol anchor biosynthesis protein 11 [Saccharomyc...
4.0E-74 [1..219] [1..219]
gi|123984437, gi... - gi|123998401|gb|ABM86802.1| phosphatidylinositol glycan anchor biosynthesis, class F [synthetic cons...
PIGF - phosphatidylinositol glycan anchor biosynthesis, class F
1.0E-46 [44..215] [26..202]
SPCC1450.15 - pig-F
YCKF_SCHPO - Uncharacterized protein C1450.15 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC1450....
6.0E-46 [44..216] [321..499]
gi|6587811, gi|2... - gi|6587811|gb|AAF18502.1|AC010924_15 ESTs gb|AI992787, gb|T20398 come from this gene. [Arabidopsis t...
1.0E-45 [41..199] [26..195]
PIGF_MOUSE - Phosphatidylinositol-glycan biosynthesis class F protein OS=Mus musculus GN=Pigf PE=1 SV=1
4.0E-44 [44..215] [26..202]
gi|7507776 - gi|7507776|pir||T16867 probable cytochrome P450 T13C5.1 [similarity] - Caenorhabditis elegans
3.0E-20 [122..209] [18..123]

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Predicted Domain #1
Region A:
Residues: [1-120]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPAKKRTRKT VKKTVSFSDD TTLTTHQNRE KKNVDHDRPP VYVRKTPLMT FPYHLVALLY  60
   61 YYVFVSSNFN TVKLLSFLIP TQVAYLVLQF NKCTVYGNKI IKINYSLTII CLGVTFLLSF 120
  121 

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [121-219]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PTMLLTILFG APLMDLLWET WLLSLHFAFL AYPAVYSVFN CDFKVGLWKK YFIFIVVGGW  60
   61 ISCVVIPLDW DRDWQNWPIP IVVGGYLGAL VGYTIGAYI

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle