| Protein: | CFT1 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 1357 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CFT1.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..1347] | [1..1438] |
|
|
0.0 | [1..1347] | [1..1437] |
|
|
0.0 | [1..1347] | [1..1435] |
|
|
0.0 | [1..1357] | [1..1357] |
|
|
0.0 | [5..1347] | [6..1414] |
|
|
0.0 | [7..1346] | [10..1084] |
|
Region A: Residues: [1-722] |
1 11 21 31 41 51
| | | | | |
1 MNVYDDVLDA TVVSHSLATH FTTSDYEELL VVRTNILSVY RPTRDGKLYL TDEFKFHGLI 60
61 TDIGLIPQKD SPLSCLLLCT GVAKISILKF NTLTNSIDTL SLHYYEGKFK GKSLVELAKI 120
121 STLRMDPGSS CALLFNNDII AFLPFHVNKN DDDEEEEDED ENIDDSELIH SMNQKSQGTN 180
181 TFNKRKRTKL GDKFTAPSVV LVASELYEGA KNIIDIQFLK NFTKPTIALL YQPKLVWAGN 240
241 TTISKLPTQY VILTLNIQPA ESATKIESTT IAFVKELPWD LHTIVPVSNG AIIVGTNELA 300
301 FLDNTGVLQS TVLLNSFADK ELQKTKIINN SSLEIMFREK NTTSIWIPSS KSKNGGSNND 360
361 ETLLLMDLKS NIYYIQMEAE GRLLIKFDIF KLPIVNDLLK ENSNPKCITR LNATNSNKNM 420
421 DLFIGFGSGN ALVLRLNNLK STIETREAHN PSSGTNSLMD INDDDDEEMD DLYADEAPEN 480
481 GLTTNDSKGT VETVQPFDIE LLSSLRNVGP ITSLTVGKVS SIDDVVKGLP NPNKNEYSLV 540
541 ATSGNGSGSH LTVIQTSVQP EIELALKFIS ITQIWNLKIK GRDRYLITTD STKSRSDIYE 600
601 SDNNFKLHKG GRLRRDATTV YISMFGEEKR IIQVTTNHLY LYDTHFRRLT TIKFDYEVIH 660
661 VSVMDPYILV TVSRGDIKIF ELEEKNKRKL LKVDLPEILN EMVITSGLIL KSNMCNEFLI 720
721 GL
|
| Detection Method: |  |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [723-986] |
1 11 21 31 41 51
| | | | | |
1 SKSQEEQLLF TFVTADNQII FFTKDHNDRI FQLNGVDQLN ESLYISTYQL GDEIVPDPSI 60
61 KQVMINKLGH DNKEEYLTIL TFGGEIYQYR KLPQRRSRFY RNVTRNDLAI TGAPDNAYAK 120
121 GVSSIERIMH YFPDYNGYSV IFVTGSVPYI LIKEDDSTPK IFKFGNIPLV SVTPWSERSV 180
181 MCVDDIKNAR VYTLTTDNMY YGNKLPLKQI KISNVLDDYK TLQKLVYHER AQLFLVSYCK 240
241 RVPYEALGED GEKVIGYDEN VPHA
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [987-1357] |
1 11 21 31 41 51
| | | | | |
1 EGFQSGILLI NPKSWKVIDK IDFPKNSVVN EMRSSMIQIN SKTKRKREYI IAGVANATTE 60
61 DTPPTGAFHI YDVIEVVPEP GKPDTNYKLK EIFQEEVSGT VSTVCEVSGR FMISQSQKVL 120
121 VRDIQEDNSV IPVAFLDIPV FVTDSKSFGN LLIIGDAMQG FQFIGFDAEP YRMISLGRSM 180
181 SKFQTMSLEF LVNGGDMYFA ATDADRNVHV LKYAPDEPNS LSGQRLVHCS SFTLHSTNSC 240
241 MMLLPRNEEF GSPQVPSFQN VGGQVDGSVF KIVPLSEEKY RRLYVIQQQI IDRELQLGGL 300
301 NPRMERLAND FYQMGHSMRP MLDFNVIRRF CGLAIDRRKS IAQKAGRHAH FEAWRDIINI 360
361 EFSMRSLCQG K
|
| Detection Method: | |
| Confidence: | 126.568636 |
| Match: | PF03178 |
| Description: | CPSF A subunit region |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
